RMgmDB - Rodent Malaria genetically modified Parasites

Search for genetically modified parasite lines by:

Gene ID (single gene): P. falciparum or rodent parasite  



       
 
 
 
 
  

Gene ID (multiple genes): P. falciparum or rodent parasite  

Each gene IDs must be placed on a separate line.
Do not use spaces, commas, semi-colons, etc.

The output from this search will include the following fields (in CSV format):
Gene ID (rodent and P. falciparum), RMgm ID, (un)successful modification, type of genetic modification, life cycle stages with phenotype.


         

For example ama1, ookinete, gamete, GFP

First select the phenotype:

Then select the type of modification:

         

Search database by RMgm ID



5303 results for:

  1. RMgm-5365
    Malaria parasiteP. berghei
    Genotype
    TaggedGene model (rodent): PBANKA_1322200; Gene model (P.falciparum): PF3D7_1458500; Gene product: spindle assembly abnormal protein 4, putative (SAS4)
    Name tag: GFP
    TaggedGene model (rodent): PBANKA_0202700; Gene model (P.falciparum): PF3D7_0111000; Gene product: kinesin-8B, putative
    Name tag: mCherry
    Phenotype Gametocyte/Gamete;

  2. RMgm-5366
    Malaria parasiteP. yoelii
    Genotype
    DisruptedGene model (rodent): PY17X_1004800; Gene model (P.falciparum): PF3D7_0405700; Gene product: lysine decarboxylase, putative (amino acid decarboxylase, AAD; UIS14)
    Phenotype Gametocyte/Gamete; Fertilization and ookinete; Oocyst; Sporozoite;

  3. RMgm-5367
    Malaria parasiteP. berghei
    Genotype
    DisruptedGene model (rodent): PBANKA_1431500; Gene model (P.falciparum): PF3D7_1215800; Gene product: radial spoke head protein 9, putative (RSP9)
    Transgene
    		 Transgene not Plasmodium: GFP
    Promoter: Gene model: PBANKA_1133300; Gene model (P.falciparum): PF3D7_1357100; Gene product: elongation factor 1-alpha (eef1a)
    3'UTR: Gene model: PBANKA_0719300; Gene product: bifunctional dihydrofolate reductase-thymidylate synthase, putative (dhfr/ts)
    Replacement locus: Gene model: PBANKA_0306000; Gene product: 6-cysteine protein (230p)
    Phenotype Gametocyte/Gamete; Fertilization and ookinete; Oocyst; Sporozoite; Liver stage;

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Conceptual design of the database: Dr. C.J. Janse (Leiden Malaria Research Group, Leiden, The Netherlands).
Technical design and realization: S. Mededovic and A. van Wigcheren