Back to search resultsSummaryRMgm-1598
|
||||||||||
*RMgm-1598| Successful modification | The parasite was generated by the genetic modification |
| The mutant contains the following genetic modification(s) | Gene mutation, Gene tagging |
| Reference (PubMed-PMID number) |
Reference 1 (PMID number) : 25185663 |
| MR4 number | |
| top of page | |
| Parent parasite used to introduce the genetic modification | |
| Rodent Malaria Parasite | P. berghei |
| Parent strain/line | P. berghei ANKA |
| Name parent line/clone | P. berghei ANKA 2.34 |
| Other information parent line | P. berghei ANKA 2.34 is a cloned, gametocyte producer line of the ANKA strain (PubMed: PMID: 15137943). |
| top of page | |
| The mutant parasite was generated by | |
| Name PI/Researcher | Tremp, AZ; Dessens JT |
| Name Group/Department | Pathogen Molecular Biology Department, Faculty of Infectious and Tropical Diseases |
| Name Institute | London School of Hygiene and Tropical Medicine |
| City | London |
| Country | UK |
| top of page | |
| Name of the mutant parasite | |
| RMgm number | RMgm-1598 |
| Principal name | IMC1a/mCherry-Mutant 1 |
| Alternative name | |
| Standardized name | |
| Is the mutant parasite cloned after genetic modification | Yes |
| top of page | |
| Phenotype | |
| Asexual blood stage | Not different from wild type |
| Gametocyte/Gamete | Not different from wild type |
| Fertilization and ookinete | Not different from wild type |
| Oocyst | Parasite lines IMC1a/mCherry-Mutant 1 displayed mCherry-based fluorescence in mature oocysts and sporozoites, as expected, demonstrating that the full-length IMC1a protein was expressed. However, in the mutant sporozoites the fluorescence levels were markedly lower compared to parasite line IMC1a/mCherry-WT (RMgm-1597) as a result of significantly lower (90%) IMC1a protein expression. |
| Sporozoite | Parasite lines IMC1a/mCherry-Mutant 1 displayed mCherry-based fluorescence in mature oocysts and sporozoites, as expected, demonstrating that the full-length IMC1a protein was expressed. However, in the mutant sporozoites the fluorescence levels were markedly lower compared to parasite line IMC1a/mCherry-WT (RMgm-1597) as a result of significantly lower (90%) IMC1a protein expression. Microscopic examination of sporozoites from IMC1a/mCherry-Mutant 1 indicated that they had an abnormal shape (less severe than is the case after a complete knockout of IMC1a expression). Salivary gland sporozoite numbers for Mutant 1 were consistently lower (10-fold) than those observed for IMC1a/mCherry-WT parasites (RMgm-1597) Sporozoites did not infect mice after mosquito bite |
| Liver stage | Sporozoites did not infect mice after mosquito bite |
| Additional remarks phenotype | Mutant/mutation Salivary gland sporozoite numbers for Mutant 1 were consistently lower (10-fold) than those observed for IMC1a/mCherry-WT parasites (RMgm-1597) Additional information Evidence is presented that: Other mutants |
Mutated: Mutant parasite with a mutated gene| top of page | |||||||||||||||||||||||||||
| Details of the target gene | |||||||||||||||||||||||||||
| Gene Model of Rodent Parasite | PBANKA_0402600 | ||||||||||||||||||||||||||
| Gene Model P. falciparum ortholog | PF3D7_0304000 | ||||||||||||||||||||||||||
| Gene product | inner membrane complex protein 1a, putative | ||||||||||||||||||||||||||
| Gene product: Alternative name | IMC1a, ALV1 | ||||||||||||||||||||||||||
| top of page | |||||||||||||||||||||||||||
| Details of the genetic modification | |||||||||||||||||||||||||||
| Short description of the mutation | The N-terminal cysteine motif has been removed | ||||||||||||||||||||||||||
| Inducable system used | No | ||||||||||||||||||||||||||
| Short description of the conditional mutagenesis | Not available | ||||||||||||||||||||||||||
| Additional remarks inducable system | |||||||||||||||||||||||||||
| Type of plasmid/construct | (Linear) plasmid double cross-over | ||||||||||||||||||||||||||
| PlasmoGEM (Sanger) construct/vector used | No | ||||||||||||||||||||||||||
| Modified PlasmoGEM construct/vector used | No | ||||||||||||||||||||||||||
| Plasmid/construct map | |||||||||||||||||||||||||||
| Plasmid/construct sequence | |||||||||||||||||||||||||||
| Restriction sites to linearize plasmid | |||||||||||||||||||||||||||
| Selectable marker used to select the mutant parasite | hdhfr | ||||||||||||||||||||||||||
| Promoter of the selectable marker | pbdhfr | ||||||||||||||||||||||||||
| Selection (positive) procedure | pyrimethamine | ||||||||||||||||||||||||||
| Selection (negative) procedure | No | ||||||||||||||||||||||||||
| Additional remarks genetic modification | To allow mCherry tagging of IMC1a, an approximately 3.5 kb fragment corresponding to the entire imc1a gene (introns included) plus 5'-UTR was PCR amplified from P. berghei gDNA using primers pDNR-imc1a-F (ACGAAGTTATCAGTCGAGGTAC-CTTTCATGATTCTATCTATTGTTAATTTTAATTG) and pDNR-imc1a-R (ATGAGGGCCCCTAAGCTTTTATCTTGATTACAAAAATAATTACAA-CATTTG) and introduced into SalI/HindIII-digested pDNR-mCherry by in-fusion to give plasmid pDNR-IMC1a/mCherry. To substitute the N-terminal cysteine motif of IMC1a (Mutant 1) primers IMC1a-Mut1-F (GAAAATAAATAGTAATCTC-GAGCATGATGAGTTGGGAGAAGACA) and IMC1a-Mut1-R(ATTACTATTTATTTTCCATGCATCAAACATTTTAATTAAATG) were used to PCR amplify pDNR-IMC1a/mCherry, and the PCR product was circularized by in-fusion to give plasmid pDNR-IMC1a-Mutant 1. Introduction of a diagnostic XhoI site changes the double cysteine (CC) in the amino-terminal motif to leucine-glutamate (LE). To substitute the C-terminal cysteine motif of IMC1a (Mutant 2) primers IMC1a-Mut2-F (CTCGAGAAT-TATTTTTGGAATCAAGATAAAAGCTTAGGGGC) and IMC1a-Mut2-R (CCAAAAATAATTCTCGAGTTTGTCTTCAGAATTATCACTTTTTTTT) were used to PCR amplify pDNR-IMC1a/mCherry, and the PCR product was circularized by in-fusion to give plasmid pDNR-IMC1a-Mutant 2. Introduction of a diagnostic XhoI site changes the double cysteine (CC) in the carboxy-terminal motif to leucine-glutamate (LE). To substitute the double cysteine from the C-terminal cysteine motif of IMC1a (Mutant 3) primers IMC1a-Mut3-F (CTCGAGAATTATTTTTGTAATCAAGATAAAAGCTTAGGGGC) andIMC1a-Mut3-R (ACAAAAATAATTCTCGAGTTTGTCTTCAGAATTAT-CACTTTTTTTT) were used to PCR amplify pDNR-IMC1a/mCherry, and the PCR product was circularized by in-fusion to give plasmid pDNR-IMC1a-Mutant 3. This mutation introduces a diagnostic XhoI restriction site, changing the double cysteine (CC) in the carboxy-terminal motif to leucine-glutamate (LE). To substitute the single cysteine from the C-terminal cysteine motif of IMC1a (Mutant 4) primers IMC1a-Mut4-F (TTATTTCGCGAATCAAGATAAAAGCTTAGGGGC) and IMC1a-Mut4-R (TTGATTCGCGAAATAATTACAACATTTGTCTTCAGAATTATCACT) were used to PCR amplify pDNR-IMC1a/mCherry, and the PCR product was circularized by in-fusion to give plasmid pDNR-IMC1a-Mutant 4. This mutation introduces a diagnostic NruI restriction site, changing the single cysteine (C) in the carboxy-terminal motif to alanine (A) Primers hDHFR/ERI-F (ACAAAGAATTCATG-GTTGGTTCGCTAAACT) and hDHFR/ERI-R (ACCATGAATTCTTTGTAACATTTAGGTGTGTATTTATATATATAAGC) were used to PCR amplify plasmid pLP-hDHFR. The PCR product was circularized by in-fusion, to give plasmid pLP-hDHFR/EcoRI. In this plasmid the BamHI restriction site at beginning of the hDHFR gene is replaced with an EcoRI recognition sequence. A 1.7 kb fragment corresponding to the hdhfr-yfcu gene was PCR amplified from plasmid pL0035 with primers hDHFRyFCU-F (ATGTTA-CAAAGAATTCATGGTTGGTTCGCTAAACTG) and hDHFRyFCU-R (AAGAAAAACGGGATCCTTAAACACAGTAGTATCTGTCACCAAAG) and introduced into EcoRI/BamHI-digested pLP-hDHFR/EcoRI by in-fusion to give pLP-hDHFRyFCU. A 0.75 kb fragment corresponding to the 3'UTR of the imc1a gene was amplified from P. berghei gDNA with primers pLP-imc1a-F (ATATGCTAGAGCG-GCCAAAATATGGTATTTTAAAACTATTGAATTGG) and pLP-imc1a-R (CACCGCGGTGGCGGCCAGCGACACTTAAGAGATAGCATAAGA) and introduced into NotI-digested pLP-hDHFRyFCU by in-fusion to give plasmid pLP-hDHFRyFCU/IMC1a. Creloxp recombination of pDNR-IMC1a/mCherry, pDNR-IMC1a-Mutant 1 and pDNR-IMC1a-Mutant 2, pDNR-IMC1a-Mutant3 and pDNR-IMC1a-Mutant 4 was carried out with pLP-hDHFRyFCU/IMC1a to give the final targeting vectors pLP-IMC1a/mCherry-WT, pLP-IMC1a/mCherry-Mutant 1 to pLP-IMC1a/mCherry-Mutant 4, respectively. | ||||||||||||||||||||||||||
| Additional remarks selection procedure | |||||||||||||||||||||||||||
| |||||||||||||||||||||||||||
| top of page | |||||||||||||||||||||||||||
Tagged: Mutant parasite with a tagged gene| top of page | |||||||||||||||||||||||||||
| Details of the target gene | |||||||||||||||||||||||||||
| Gene Model of Rodent Parasite | PBANKA_0402600 | ||||||||||||||||||||||||||
| Gene Model P. falciparum ortholog | PF3D7_0304000 | ||||||||||||||||||||||||||
| Gene product | inner membrane complex protein 1a, putative | ||||||||||||||||||||||||||
| Gene product: Alternative name | IMC1a, ALV1 | ||||||||||||||||||||||||||
| top of page | |||||||||||||||||||||||||||
| Details of the genetic modification | |||||||||||||||||||||||||||
| Name of the tag | mCherry | ||||||||||||||||||||||||||
| Details of tagging | C-terminal | ||||||||||||||||||||||||||
| Additional remarks: tagging | |||||||||||||||||||||||||||
| Commercial source of tag-antibodies | |||||||||||||||||||||||||||
| Type of plasmid/construct | (Linear) plasmid double cross-over | ||||||||||||||||||||||||||
| PlasmoGEM (Sanger) construct/vector used | No | ||||||||||||||||||||||||||
| Modified PlasmoGEM construct/vector used | No | ||||||||||||||||||||||||||
| Plasmid/construct map | |||||||||||||||||||||||||||
| Plasmid/construct sequence | |||||||||||||||||||||||||||
| Restriction sites to linearize plasmid | |||||||||||||||||||||||||||
| Selectable marker used to select the mutant parasite | hdhfr | ||||||||||||||||||||||||||
| Promoter of the selectable marker | pbdhfr | ||||||||||||||||||||||||||
| Selection (positive) procedure | pyrimethamine | ||||||||||||||||||||||||||
| Selection (negative) procedure | No | ||||||||||||||||||||||||||
| Additional remarks genetic modification | |||||||||||||||||||||||||||
| Additional remarks selection procedure | |||||||||||||||||||||||||||
| |||||||||||||||||||||||||||
| top of page | |||||||||||||||||||||||||||