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Type and details of transgene |
Is the transgene Plasmodium derived |
Transgene: not Plasmodium |
Transgene name | mCherry |
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Details of the genetic modification |
Inducable system used | No |
Additional remarks inducable system |
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Type of plasmid/construct | (Linear) plasmid double cross-over |
PlasmoGEM (Sanger) construct/vector used | No |
Modified PlasmoGEM construct/vector used | No
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Plasmid/construct map |
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Plasmid/construct sequence |
GAGCTCGGTACCCTTCTTCGTACATATATGTAGCTTTATTTTTATGACGACAGTAAGTTT
TTAATTTATAAAATCGTTATATCTCATAAAAAATTATTATTACATGTTCATAATTTTTTT
TCTCTCATGTTATATATAGCTAGTTGAAAAAAATAGCTAGCTCACACACACATATAATAA
ATATATGTTTGGATGCCCATTTGCATTTTGTGCATCAACCTTTTGCCTTGCATGTTCATA
TATACATTACTTTGTTTATTGTATTATTATTCATTCGTTTTACTCGTTCATATTTTACCA
GTCATTTATTATTTTTTTATTATTGTTCATGTAAAAATTTTCGCTTGTGGTTGCATACAT
CGTGTTATTTGTAAGCACGACGAACAGAATACTCATATTCGCAATGCATACTTTTACATG
TCACAAAATTTACTCAATATATATATGTGTATCGATTTTATTATACTTTTATTTTTTATC
AATTATTGTTTTAATCAAAATTGTTAATAATGAAATAAATAAATAAATAAATAAATAAAT
AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATACATAAATAATAACCAAAAA
ATGAATGCATATATTGTATGCAGATAATGTCGCGTTTAAGAGAAAACAACGAAGGTTGAA
AGAAGCGAATGGATCAACGGAATTAAATAATTTTATTGAATTACTGTGTGCATTCTCATT
GTTATTTGGGAGGTGTTTTATTTTTTACATATTTAAAGGATTTTAAAATGGTGATTAAAA
TGTAAAGGGTAGATAGGAAACTGGTATCATAATTGTTAGAGGAAGAAATAGCATTTTATT
CATGTCTAGATATATTTGTTTTTTCGAATTTCTCATTCTTTTATATTATTACAATTTGCG
GCCGCAAATTGCTCTAGATTACTTGTACAGCTCGTCCATGCCGCCGGTGGAGTGGCGGCC
CTCGGCGCGTTCGTACTGTTCCACGATGGTGTAGTCCTCGTTGTGGGAGGTGATGTCCAA
CTTGATGTTGACGTTGTAGGCGCCGGGCAGCTGCACGGGCTTCTTGGCCTTGTAGGTGGT
CTTGACCTCAGCGTCGTAGTGGCCGCCGTCCTTCAGCTTCAGCCTCTGCTTGATCTCGCC
CTTCAGGGCGCCGTCCTCGGGGTACATCCGCTCGGAGGAGGCCTCCCAGCCCATGGTCTT
CTTCTGCATTACGGGGCCGTCGGAGGGGAAGTTGGTGCCGCGCAGCTTCACCTTGTAGAT
GAACTCGCCGTCCTGCAGGGAGGAGTCCTGGGTCACGGTCACCACGCCGCCGTCCTCGAA
GTTCATCACGCGCTCCCACTTGAAGCCCTCGGGGAAGGACAGCTTCAAGTAGTCGGGGAT
GTCGGCGGGGTGCTTCACGTAGGCCTTGGAGCCGTACATGAACTGAGGGGACAGGATGTC
CCAGGCGAAGGGCAGGGGGCCACCCTTGGTCACCTTCAGCTTGGCGGTCTGGGTGCCCTC
GTAGGGGCGGCCCTCGCCCTCGCCCTCGATCTCGAACTCGTGGCCGTTCACGGAGCCCTC
CATGTGCACCTTGAAGCGCATGAACTCCTTGATGATGGCCATGTTATCCTCCTCGCCCTT
GCTCACCATGGATCCTTATATATTTAACACTATTAATTTATCTTATTTTTTCAAATTTAT
TATATGTAGAAGAAAAAAAAAAAAATTCAAACTAAAATCCTATGCATTACTTCTACCCTC
TATAAATACACTAACAAAATATTTAAACACATTCTGAAAATTTACTTTTTTTTTTTATTA
TATTGTCAAATTGTATGATATTTTTTTTTATTTTATCTGCGCCCAAACTTTAATGTATCC
TTCGTGCATATATAATGGGTAATATAATTTTGAATATATATTATATGTATTTTTTTTTTC
ACTGTTTTTTTAATAAATAAGAAAACTTTTTCTCATATCCATGCTCACATTTATGCTCAT
ATTTTGATTTTTCTATCAATATATTATAAAGACAAATTTGTGATGTTGTGTCTAATTATC
AGTTGTAATTTTTAAAACTATATTTTACGAAACATGTTTATTTTTCAAATAAAAAGATGT
AATAAAAATGTACAACCATTTATGCATGCTTTGTTAAATTTTGTATAGCCAAATTATTAA
TTGTAAAAAAAAAAATGCTCATACACATATGAGAAAAAGACAACCTTTTTGCAATTAACG
AAGGTTATTTATTTATATTCATATACTGATGTGTGTATATATTTATTTATAATATTTAAT
ATTGATTAGTATATATCAAATGTATAAAACCAACAATTTGGAGAATATTTTATTGTCAAA
ATAAGCCTGATTAATAAAAGTGAAAAATAATTGCATGCACAAAAGACAGAAAAAAAATTT
ATTTATTTCCATTGTTTTAGAGACCTTTGAATACATGCATTTTTTTGTTTTATATTGAAG
ACTTATTCTATAAAGTGACGTTTCATCATGTTATTTATTATTATTATTATTTTTATTTTT
TATTTATTTATTTTTATTTTTTATTTATTTATTTTTATTTTTTTTTTTTTAATGCAACTA
CCAACAAAAAAATAATTAAGCTTTAAAATTGTTGAAAATAAGTAGAGAATTTTATAATAT
AATTTTTAAAGACACCCTAAGTGAAATGAAAATATTTCTAAAAGTATACAAAAGTTTTTT
CCCCTTTTTTATATTTTCCAAATTTTATGAAATGCATTTTTAAATAAAAAAATCACTGCA
GTAATTTGAAAAAATGCATATAAAAATAATACCAAGACAAATATCTATACATATATATAT
ATATATATATATTTATGCTTGTTTATTTTGTTTCCATTTTTTTCATTGCTTTTTATTTTT
TTTATGATTAAAAATTATATAAATAATGCATGAGTAAGTGTCTGTGGATTTGTAGTCAGT
TCGCTACTATTTGAACTATGGTTATTTTATTTTATTTTATTTCCCGAAATACATCCATCT
TATTTTATTTCAAAACATGAATAAGCCTATCATACGAATAGTTACATATATATATTTTTC
TTTTTTTCGAGAAAATAACACTAAAAAAAAAGGAAATAAGTACATACTACATTTTAATTT
AACTTTTTAGGTGAGTTAAATAACTATAGCTTATATATCTCTATATTTTTACATTAACAA
AATTCACCTGCACATATGTGGAAACTTAAGGCGCAAGGGCGAATTCTGCAGATATCCATC
ACACTGGCGGCCGCCCTGCAGGCATGCAAGCTTGATGTGTTTTATTTGGATGTGCAATAA
TAGGTTTGTGATTCACCATTGGAAAATCATTATAATCATATATTTCATCTTCATTTACAT
ATTTGACTAAAACCGTTTTTACAATTTGTTCTGTTTCTTTATCTACACAATGACATTCAA
ATTGATACGATTTTGTTAATGTATAATTARAACCAGCTAGCGCATATTCTGGATTTTCAA
ATGAATAGTTAATAACATTTTTAGTATTAATTTTATTGGCGTCATTTAGATACCCTTTTT
CATATACTTGCGTAAAACAATTTTTTGGCATTTTTTTTGTATTTACTGGGCATCTAAAAC
CAAAACTTGTATTTGATTTGGAAATTATTATGCATACATCCCCTTCAGTATAAGCATTCA
AATAATTATATAATTCTCCTTTTCGAAAATCACAAAATGAAACTGGTCTATCTTTTAAAT
CAGTTCGAACATGCAATAAAATAATTGCTCTTTTATAACTAGTTCCACCATTTGTTACAC
CACATTCTATTGTTAGTGGATATGATCCATGATTTATAAATGATGTCATAAAGAATTTAA
AACCTTTAAACTGATCATTTATTTCTGGTATATCTATATCTTTTGTATTAAAAAATAAAT
CTGTAAATTTATTTATAGGAAATACATTATTTAAATATTTTATTGTGTTAGTAGGTTCTT
TACCATATACCCGCGGAAGCTTGGCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATT
GTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGG
GTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGT
CGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTT
TGCGTATTGGGCGCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGC
TGCGGCGAGCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGG
ATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGG
CCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGAC
GCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTG
GAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCT
TTCTCCCTTCGGGAAGCGTGGCGCTTTCTCAATGCTCACGCTGTAGGTATCTCAGTTCGG
TGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCT
GCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCAC
TGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGT
TCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTC
TGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCA
CCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGAT
CTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCAC
GTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAAATT
AAAAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGGTCTGACAGTTACC
AATGCTTAATCAGTGAGGCACCTATCTCAGCGATCTGTCTATTTCGTTCATCCATAGTTG
CCTGACTCCCCGTCGTGTAGATAACTACGATACGGGAGGGCTTACCATCTGGCCCCAGTG
CTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGC
CAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTA
TTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTG
TTGCCATTGCTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCT
CCGGTTCCCAACGATCAAGGCGAGTTACATGATCCCCCATGTTGTGCAAAAAAGCGGTTA
GCTCCTTCGGTCCTCCGATCGTTGTCAGAAGTAAGTTGGCCGCAGTGTTATCACTCATGG
TTATGGCAGCACTGCATAATTCTCTTACTGTCATGCCATCCGTAAGATGCTTTTCTGTGA
CTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGCGGCGACCGAGTTGCTCTT
GCCCGGCGTCAATACGGGATAATACCGCGCCACATAGCAGAACTTTAAAAGTGCTCATCA
TTGGAAAACGTTCTTCGGGGCGAAAACTCTCAAGGATCTTACCGCTGTTGAGATCCAGTT
CGATGTAACCCACTCGTGCACCCAACTGATCTTCAGCATCTTTTACTTTCACCAGCGTTT
CTGGGTGAGCAAAAACAGGAAGGCAAAATGCCGCAAAAAAGGGAATAAGGGCGACACGGA
AATGTTGAATACTCATACTCTTCCTTTTTCAATATTATTGAAGCATTTATCAGGGTTATT
GTCTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAACAAATAGGGGTTCCGC
GCACATTTCCCCGAAAAGTGCCACCTGACGTCTAAGAAACCATTATTATCATGACATTAA
CCTATAAAAATAGGCGTATCACGAGGCCCTTTCGTCTCGCGCGTTTCGGTGATGACGGTG
AAAACCTCTGACACATGCAGCTCCCGGAGACGGTCACAGCTTGTCTGTAAGCGGATGCCG
GGAGCAGACAAGCCCGTCAGGGCGCGTCAGCGGGTGTTGGCGGGTGTCGGGGCTGGCTTA
ACTATGCGGCATCAGAGCAGATTGTACTGAGAGTGCACCATATGCGGTGTGAAATACCGC
ACAGATGCGTAAGGAGAAAATACCGCATCAGGCGCCATTCGCCATTCAGGCTGCGCAACT
GTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGAT
GTGCTGCAAGGCGATTAAGTTGGGTAACGCCAGGGTTTTCCCAGTCACGACGTTGTAAAA
CGACGGCCAGTGAATTCGCCCTTTCCCCGCGGGTATGGAACTACATCTATATAGGAAATT
TGTTTATTTTTATATTTAGGTTTTGAATCTAGATATTCATAATTTTTAATATATATTGTT
CCTATATTTTTGGTTTTATAATCTTCACATGTACAATAAAAATCAAACTCTTTTTTTGTA
ATTTTGGAAATCATCAAAAAGGTTGATGAATTATTTATAAAATAATCTGCATCTATAACT
TTTATTTCGTTAAATATATTTTCTATATTTTCGGTTGTTTGTTCATTCATATTACTTTTT
ATATATACATTTCTAAAACAATTTTTTGGATTAATTTTACCAGTTGGACAATTTAAGCTA
ACTACTATATTTTCTTTTAATTCTATTTCACAAAACTCATTTTTTTTTTCTAAATCATAA
ACATTGGAATAGTAAAATGTTTTTTTAGAATTACCTGAAAAGTCACATCCATAAAATTTA
TTTTTTGTTGTATTTTGAGAAATCCTTATTACTGTAATACCTTTTTTCCCTTTCATATTA
TTAATTATTGTTTTAGTATTATCACAATATATTTTTAATATTAATACCTTTTCTACAATT
AATGGAGTAACAAAAGTGAAATGTCCTTTTTCTTTGAACATTTTATTTTTATCTAATATG
ATAACACCTGGTAATATATCATCTAGCTTTTCTTTTTTGTCTAGATGCATTACTTCATCG
TTTTCTGGTATGTATTCTATATTTTTATATTTCTCTATTTCTTCTGGTTCAACATCTGTA
TTTTCTAAATAAAAATTATTTTGTTGACTACTTCGTGATGTTACCTTGGTGTCTATTATG
GTATTACCATCAAAAATATCATCACTTTTTATAATTTTTGGACATTTAACTTGAACCATA
TTCAGATTATGTTCTAGATGTATATAACATGAATGAATTGTATCTATTTCATTAACGGGC
TCAAGAGAATTC
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Restriction sites to linearize plasmid |
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Selectable marker used to select the mutant parasite | hdhfr/yfcu |
Promoter of the selectable marker | eef1a |
Selection (positive) procedure | No |
Selection (negative) procedure | 5-fluorocytosine (5-FC) |
Additional remarks genetic modification | |
Additional remarks selection procedure | This reporter mutant expressing mCherry does not contain a drug-selectable marker.
The mutant has been generated in the reference line GIMOPbANKA (RMgm-687). The GIMO mother line is used for introduction of transgenes into the modified 230p locus through transfection with constructs that target the 230p locus. These constructs insert into the 230p locus (‘gene insertion’), thereby removing the hdhfr::yfcu selectable marker (‘marker out’) from the genome of the mother lines. Transgenic parasites that are marker-free are subsequently selected by applying negative drug selection using 5-FC. This selection procedure is performed in vivo in mice. |
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Other details transgene |
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Promoter |
Gene Model of Parasite |
PBANKA_0808100
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Gene Model P. falciparum ortholog |
PF3D7_0317100
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Gene product | 6-cysteine protein |
Gene product: Alternative name | B9 |
Primer information details of the primers used for amplification of the promoter sequence
Primer information details of the primers used for amplification of the promoter sequence
Sequence Primer 1 | GCGCCTTAAGTTTCCACATATGTGCAGGTG |
Additional information primer 1 | 5497 (AflII); B9 promoter F |
Sequence Primer 2 | CGGGATCCTTATATATTTAACACTATTAATTTATCTTA |
Additional information primer 2 | 5498 (BamHI); B9 promoter R |
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3'-UTR |
Gene Model of Parasite |
PBANKA_0808100
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Gene product | 6-cysteine protein |
Gene product: Alternative name | B9 |
Primer information details of the primers used for amplification the 3'-UTR sequences
Primer information details of the primers used for amplification the 3'-UTR sequences
Sequence Primer 1 | AAGGAAAAAAGCGGCCGCAAATTGTAATAATATAAAAGAATGAGAAATTCG |
Additional information primer 1 | 4694 (NotI); B9 3'UTR F |
Sequence Primer 2 | gcGGTACCCTTCTTCGTACATATATGTAGC |
Additional information primer 2 | 5135 (NotI); B9 3'UTR R |
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Insertion/Replacement locus |
Replacement / Insertion | Replacement locus |
Gene Model of Parasite |
PBANKA_0306000
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Gene product | 6-cysteine protein |
Gene product: Alternative name | 230p |
Primer information details of the primers used for amplification of the target sequences
Primer information details of the primers used for amplification of the target sequences
Sequence Primer 1 | |
Additional information primer 1 | |
Sequence Primer 2 | |
Additional information primer 2 | |
Sequence Primer 3 | |
Additional information primer 3 | |
Sequence Primer 4 | |
Additional information primer 4 | |
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