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Details of the target gene |
Gene Model of Rodent Parasite |
PBANKA_0905900
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Gene Model P. falciparum ortholog |
PF3D7_1143100
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Gene product | AP2 domain transcription factor AP2-O, putative |
Gene product: Alternative name | AP2-O, AP2 in ookinetes; ApiAP2 |
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Details of the genetic modification |
Inducable system used | No |
Additional remarks inducable system |
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Type of plasmid/construct used | Plasmid double cross-over |
PlasmoGEM (Sanger) construct/vector used | No |
Modified PlasmoGEM construct/vector used | No
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Plasmid/construct map |
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Plasmid/construct sequence |
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Restriction sites to linearize plasmid |
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Partial or complete disruption of the gene | Partial |
Additional remarks partial/complete disruption |
The hdhfr selectable marker gene was integrated into the AP2-O locus, replacing a relative small part of the coding sequence
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Selectable marker used to select the mutant parasite | hdhfr |
Promoter of the selectable marker | pbdhfr |
Selection (positive) procedure | pyrimethamine |
Selection (negative) procedure | No |
Additional remarks genetic modification | Two fragments of the AP2-O gene were amplified by PCR. The fragments were annealed to either side of the selectable marker gene (human DHFR) by PCR with primers 1 and 4. |
Additional remarks selection procedure | |
Primer information: Primers used for amplification of the target sequences
Primer information: Primers used for amplification of the target sequences
Sequence Primer 1 | CGCGAGCTCGCAATATGGTATTAAATTTTGGGCTAGCCA |
Additional information primer 1 | Primer 1 (SacI) |
Sequence Primer 2 | CGCGGATCCGGTATTTTCATTGTGTTAAACGATATGTGA |
Additional information primer 2 | Primer 2 (BamHI) |
Sequence Primer 3 | CCGCTCGAGGTCCTATTTATCATTTTAAAATGTGTTTTATC |
Additional information primer 3 | Primer 3 (XhoI) |
Sequence Primer 4 | CGGGGTACCAATCGTCATAAATAGGAGTTATGAAGT |
Additional information primer 4 | Primer 4 (KpnI) |
Sequence Primer 5 | |
Additional information primer 5 | |
Sequence Primer 6 | |
Additional information primer 6 | |
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