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| Type and details of transgene |
| Is the transgene Plasmodium derived |
Transgene: not Plasmodium |
| Transgene name | the biotin ligase BirA* fused to EXP1/HEP17 (PBANKA_0926700) |
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| Details of the genetic modification |
| Inducable system used | No |
| Additional remarks inducable system |
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| Type of plasmid/construct | (Linear) plasmid single cross-over |
| PlasmoGEM (Sanger) construct/vector used | No |
| Modified PlasmoGEM construct/vector used | No
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| Plasmid/construct map |
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| Plasmid/construct sequence |
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| Restriction sites to linearize plasmid |
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| Selectable marker used to select the mutant parasite | tgdhfr |
| Promoter of the selectable marker | eef1a |
| Selection (positive) procedure | pyrimethamine |
| Selection (negative) procedure | No |
| Additional remarks genetic modification | The biotin ligase BirA* was fusedto EXP1, which is a known protein of the PVM in blood and liver stage parasites. With this aim, we generated the plasmid pL0017-CEXP1BirA*-V5, encoding an EXP1-BirA* fusion protein with a C-terminal V5 tag under control of the constitutive P. berghei eef1a promoter. This vector integrates by single-crossover homologous recombination into either the c-ssu-rRNA locus or d-ssurRNA locus of P. berghei and conveys resistance to pyrimethamine.
The pL0017-CEXP1-BirA*-V5 plasmid was generated by first amplifying the BirA* coding sequence from pcDNA3.1-mycBioID using primers BirA-V5-fw and BirA-V5-rev, whereby a V5 tag was added to the C-terminal end of BirA*. The PCR product was then cloned into pL0017 using BamHI and XbaI restriction sites. Subsequently, the EXP1 coding sequence was amplified from blood stage cDNA using primers EXP1-fw and EXP1-rev and cloned in frame with BirA*-V5 into the pL0017 vector using BamHI and NotI restriction sites. |
| Additional remarks selection procedure | |
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| Other details transgene |
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| Promoter |
| Gene Model of Parasite |
PBANKA_1133300
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| Gene Model P. falciparum ortholog |
PF3D7_1357100
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| Gene product | elongation factor 1-alpha |
| Gene product: Alternative name | eef1a |
Primer information details of the primers used for amplification of the promoter sequence 
Primer information details of the primers used for amplification of the promoter sequence
| Sequence Primer 1 | |
| Additional information primer 1 | |
| Sequence Primer 2 | |
| Additional information primer 2 | |
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| 3'-UTR |
| Gene Model of Parasite |
Not available
|
| Gene product | Not available |
| Gene product: Alternative name | |
Primer information details of the primers used for amplification the 3'-UTR sequences 
Primer information details of the primers used for amplification the 3'-UTR sequences
| Sequence Primer 1 | |
| Additional information primer 1 | |
| Sequence Primer 2 | |
| Additional information primer 2 | |
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| Insertion/Replacement locus |
| Replacement / Insertion | Insertion locus |
| Gene Model of Parasite |
Not available
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| Gene product | Not available |
| Gene product: Alternative name | small subunit ribosomal rna gene (c-or d-type unit) |
Primer information details of the primers used for amplification of the target sequences
Primer information details of the primers used for amplification of the target sequences
| Sequence Primer 1 | |
| Additional information primer 1 | |
| Sequence Primer 2 | |
| Additional information primer 2 | |
| Sequence Primer 3 | |
| Additional information primer 3 | |
| Sequence Primer 4 | |
| Additional information primer 4 | |
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