RMgmDB - Rodent Malaria genetically modified Parasites

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Summary

RMgm-979
Malaria parasiteP. yoelii
Genotype
Genetic modification not successful
DisruptedGene model (rodent): PY17X_1312000; Gene model (P.falciparum): PF3D7_1444300; Gene product: 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative (LPAAT; AGPAT)
PhenotypeNo phenotype has been described
Last modified: 4 February 2014, 11:33
  *RMgm-979
Successful modificationThe gene/parasite could not be changed/generated by the genetic modification.
The following genetic modifications were attempted Gene disruption
Number of attempts to introduce the genetic modification 3
Reference (PubMed-PMID number) Reference 1 (PMID number) : 24330260
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. yoelii
Parent strain/lineP. y. yoelii 17XNL
Name parent line/clone Not applicable
Other information parent line
Attempts to generate the mutant parasite were performed by
Name PI/ResearcherS.E. Lindner; S.H.I. Kappe; A.M. Vaughan
Name Group/DepartmentSeattle Biomedical Research Institute
Name InstituteSeattle Biomedical Research Institute
CitySeattle
CountryUSA

  Disrupted: Mutant parasite with a disrupted gene
Details of the target gene
Gene Model of Rodent Parasite PY17X_1312000
Gene Model P. falciparum ortholog PF3D7_1444300
Gene product1-acyl-sn-glycerol-3-phosphate acyltransferase, putative
Gene product: Alternative nameLPAAT; AGPAT
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/construct usedPlasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Partial or complete disruption of the geneComplete
Additional remarks partial/complete disruption
Selectable marker used to select the mutant parasitetgdhfr
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modificationThe multiple unsuccessful attempts to disrupt the lpaat gene indicates an essential function for growth/multiplication of asexual blood stages. See also RMgm-485 for independent unsuccessful attempts to disrupt the gene.
See RMgm-980 for a mutant expressing a C-terminal 4x-Myc-tagged version of LPAAT. No evidence has been found for an apicoplast location.

Fatty acids are a major component of the phospholipids that make up all cellular membranes and one hypothesis would be that the fatty acids are required for the enormous amount of membrane biosynthesis necessary late in liver stage development for the formation of tens of thousands of exoerythrocytic merozoites. The precursor of phospholipid biosynthesis is phosphatidic acid. Phosphatidic acid is formed in a three-step enzymatic reaction, the first step of which is the conversion of dihydroxyacetone phosphate (DHAP) to glycerol 3-phosphate by glycerol 3-phosphate dehydrogenase (G3PDH). Two fatty acid side chains are then transferred to glycerol 3-phosphate, firstly by glycerol 3-phosphate acyltransferase (G3PAT) to form lysophosphatidic acid and then lysophosphatidic acid acyltranferase (LPAAT) to form phosphatidic acid. Analysis of the Plasmodium genome has also uncovered two sets of genes for phosphatidic acid biosynthesis and one set is predicted to target to the apicoplast. In the rodent malaria parasite P. yoelii G3PDH and G3PAT are indeed ocalized to the apicoplast only during liver stage development, where they are essential for production of viable merozoites. Unexpectedly, there appears to be no specific apicoplast-targeted LPAAT.
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1PY01678KO-3-Fwd: KO Construct, 3'UTR Fwd
Additional information primer 1cggtaccGGGAACGGTGTATGTTTCCTATGGTGAGCC
Sequence Primer 2PY01678KO-3-Rev: KO Construct, 3'UTR Rev
Additional information primer 2ataacgggcccagctagcGCGTGATATTTTGTTCCAAAATATGAGAAATCGAAAAGAACC
Sequence Primer 3PY01678KO-5-Fwd: KO Construct, 5'UTR Fwd
Additional information primer 3cacgcgctagctgggcccGTTATTACAGAATATAACACATTTAATCGTCTGGATAATATAACAGCTTATG
Sequence Primer 4PY01678KO-5-Rev: KO Construct, 5'UTR Rev
Additional information primer 4ggcggccgcGAACTACATTACATAACCAGAATTATAATTGTGTATACGCGTG
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6