RMgmDB - Rodent Malaria genetically modified Parasites

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Summary

RMgm-5369
Malaria parasiteP. berghei
Genotype
TaggedGene model (rodent): PBANKA_0715600; Gene model (P.falciparum): PF3D7_0413600; Gene product: 26S protease regulatory subunit 6B, putative (Rpt3; PbRpt3)
Name tag: mCherry
Transgene
Transgene not Plasmodium: GFP
Promoter: Gene model: PBANKA_0711900; Gene model (P.falciparum): PF3D7_0818900; Gene product: heat shock protein 70 (HSP70)
3'UTR: Gene model: PBANKA_0719300; Gene product: bifunctional dihydrofolate reductase-thymidylate synthase, putative (dhfr/ts)
Replacement locus: Gene model: PBANKA_0306000; Gene product: PBANKA_0306000 (P230p)
Phenotype Asexual bloodstage; Gametocyte/Gamete;
Last modified: 5 January 2024, 19:18
  *RMgm-5369
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene tagging, Introduction of a transgene
Reference (PubMed-PMID number) Not published (yet)
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone Not applicable
Other information parent line
The mutant parasite was generated by
Name PI/ResearcherLaine C, Khalife J, Pierrot C
Name Group/DepartmentCIIL - Center for Infection and Immunity of Lille
Name InstituteUniv. Lille, CNRS, Inserm, CHU Lille, Institute Pasteur de Lille
CityLille
CountryFrance
Name of the mutant parasite
RMgm numberRMgm-5369
Principal namePbRpt3-mCherry
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stagePbRpt3 localization was then assessed by immunofluorescence assays. Low expression in early trophozoite stages which strongly increases during the late trophozoite stages. In schizonts, the signal corresponding to PbRpt3-mCherry seems to be less intense. Concerning the cellular distribution of PbRpt3-mCherry, it is mainly cytoplasmic in trophozoites and schizonts stages, with a punctuated localization particularly in late trophozoites.
Gametocyte/GameteGametocytes show a high level of PbRpt3-mCherry expression. In gametocytes, the IFA signal overlaps with DAPI staining, indicating that PbRpt3 is more accumulated in the nucleus at this stage
Fertilization and ookineteNot tested
OocystNot tested
SporozoiteNot tested
Liver stageNot tested
Additional remarks phenotype

Mutant/mutation
The mutant expresses a C-terminal mCherry-tagged version of PbRpt3 and expresses GFP under the constitutive hsp70 promoter

Protein (function)
The 26S proteasome is the main proteolytic machine involved in protein degradation. This macromolecular complex, consisting of a 20S core parcle assembled with one or two 19S regulatory particles, is highly regulated by phosphorylation. In the paper evidence is presented that i) the P. berghei proteasome AAA-ATPase regulatory subunit Rpt3 is highly regulated by phosphorylation; ii) that it binds to protein phosphatase 1, the major parasite phosphatase and iii) that PbRpt3 regulates the activity of the phosphatase both in vitro and in a heterologous model of Xenopus oocytes

Phenotype
PbRpt3 localization was then assessed by immunofluorescence assays. Low expression in early trophozoite stages which strongly increases during the late trophozoite stages. In schizonts, the signal corresponding to PbRpt3-mCherry seems to be less intense. Concerning the cellular distribution of PbRpt3-mCherry, it is mainly cytoplasmic in trophozoites and schizonts stages, with a punctuated localization particularly  in late trophozoites.
Gametocytes show a high level of PbRpt3-mCherry expression. In gametocytes, the IFA signal overlaps with DAPI staining, indicating that PbRpt3 is more accumulated in the nucleus at this stage.

Additional information

Other mutants


  Tagged: Mutant parasite with a tagged gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_0715600
Gene Model P. falciparum ortholog PF3D7_0413600
Gene product26S protease regulatory subunit 6B, putative
Gene product: Alternative nameRpt3; PbRpt3
Details of the genetic modification
Name of the tagmCherry
Details of taggingC-terminal
Additional remarks: tagging
Commercial source of tag-antibodies
Type of plasmid/construct(Linear) plasmid single cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitetgdhfr
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modificationThe C-terminal m-Cherry tagged PbRpt3 line was generated by single homologous recombination: a 1228-bp region of PbRpt3 starting 289 bp downstream from the start codon and lacking a stop codon was inserted into pL1886 vector (Genescript). A silent mutation was inserted in the coding sequence to generate an AvrII single cutter restriction site, in order to linearize the plasmid before transfection into PbANKA-GFP strain.
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6

  Transgene: Mutant parasite expressing a transgene
Type and details of transgene
Is the transgene Plasmodium derived Transgene: not Plasmodium
Transgene nameGFP
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/construct(Linear) plasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitehdhfr/yfcu
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedure5-fluorocytosine (5-FC)
Additional remarks genetic modification
Additional remarks selection procedure
Other details transgene
Promoter
Gene Model of Parasite PBANKA_0711900
Gene Model P. falciparum ortholog PF3D7_0818900
Gene productheat shock protein 70
Gene product: Alternative nameHSP70
Primer information details of the primers used for amplification of the promoter sequence  Click to view information
Primer information details of the primers used for amplification of the promoter sequence  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
3'-UTR
Gene Model of Parasite PBANKA_0719300
Gene productbifunctional dihydrofolate reductase-thymidylate synthase, putative
Gene product: Alternative namedhfr/ts
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to view information
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Insertion/Replacement locus
Replacement / InsertionReplacement locus
Gene Model of Parasite PBANKA_0306000
Gene productPBANKA_0306000
Gene product: Alternative nameP230p
Primer information details of the primers used for amplification of the target sequences  Click to view information
Primer information details of the primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4