RMgmDB - Rodent Malaria genetically modified Parasites

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Summary

RMgm-4682
Malaria parasiteP. berghei
Genotype
DisruptedGene model (rodent): PBANKA_0202700; Gene model (P.falciparum): PF3D7_0111000; Gene product: kinesin-8B, putative
Phenotype Gametocyte/Gamete; Fertilization and ookinete; Oocyst; Sporozoite; Liver stage;
Last modified: 27 October 2019, 14:05
  *RMgm-4682
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene disruption
Reference (PubMed-PMID number) Reference 1 (PMID number) : 31634979
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei NK65
Name parent line/clone Not applicable
Other information parent line
The mutant parasite was generated by
Name PI/ResearcherDepoix D, Kohl L
Name Group/DepartmentCNRS Molécules de Communication et Adaptation des Micro-organismes
Name InstituteMuséum National d'Histoire Naturelle, Sorbonne Universités
CityParis
CountryFrance
Name of the mutant parasite
RMgm numberRMgm-4682
Principal nameΔPbkin8B
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stageNot different from wild type
Gametocyte/GameteNormal production of male and female gametocytes. No male gamete formation as shown by absence of exflagellation centers.
Fertilization and ookineteStrongly reduced fertilisation and ookinete formation. In wild type parasites, the mean ookinete conversion rate as 63.5 ± 3.6, whereas it was only 1.2 ± 1.4 and 0.2± 0.2 for ΔPbkin8B clones 3600 and 3716.
OocystStrongly reduced fertilisation and ookinete formation. In wild type parasites, the mean ookinete conversion rate as 63.5 ± 3.6, whereas it was only 1.2 ± 1.4 and 0.2± 0.2 for ΔPbkin8B clones 3600 and 3716.
The two ΔPbkin8B mutant cell lines produced very few oocysts (mean range of 1.68/1.36 and 1.4/0.76 respectively) in comparison to wt and Pbkin8B-gfp parasites, where numerous oocysts were formed (mean values the 2 replicates of 180/171 and 187/160 oocysts per midgut respectively. No sporozoite formation observed in oocysts.
SporozoiteThe two ΔPbkin8B mutant cell lines produced very few oocysts (mean range of 1.68/1.36 and 1.4/0.76 respectively) in comparison to wt and Pbkin8B-gfp parasites, where numerous oocysts were formed (mean values the 2 replicates of 180/171 and 187/160 oocysts per midgut respectively. No sporozoite formation observed in oocysts.
Liver stageNo infection of mice by bite of infected mosquitoes
Additional remarks phenotype

Mutant/mutation
The mutant lacks expression of kinesin-8B

Protein (function)
Plasmodium axonemes display a classical “9+2” structure: 9 doublets of microtubules arranged in a circular pattern surrounding a central pair of singlet microtubules. Their mode of assembly is unusual: Plasmodium axonemes are assembled in the cytoplasm of the microgametocyte independent of intraflagellar transport, a bidirectional transport machinery essential for the construction of flagella in most other eukaryotes. The components of the axoneme, such as tubulin, are ubiquitous in the cytoplasm and are assembled upon activation.  The nuclear envelope does not break down during the 3 mitotic replications. The axonemes are however linked to the 8 replicated haploid genomes in the nucleus through spindle poles situated in nuclear pores, thus forming 8 flagellated motile microgametes, which, following violent axonemal ‘swimming’ are expelled from the microgametocyte in an exceptionally fast process called “exflagellation”. These dynamic processes will certainly require motor proteins, such as kinesins and dyneins, to transport cargoes, assemble the structure and generate the force for motility. Most dyneins involved in motility, are part of the complex organisation of outer and inner dynein arms present on each doublet microtubule. In Plasmodium, inner dynein arms are seen less often than outer dynein arms and appear thinner in electron microscopy studies.
Only 10 kinesin encoding genes are found in the P. berghei genome, fewer than in other eukaryotes. Among the kinesins identified by proteomic  studies of sexual stages, only three are present in male gametocytes and gametes. According to the comprehensive study of kinesins across eukaryotes by Wickstead et al. (2010), they belong to the families kinesin-8 (subfamily 8B), -13 and -15. Those kinesins are among the microtubule motors phosphoregulated during  P. berghei gametocyte activation. While most kinesins display predominantly one activity, either transport along microtubules or depolymerization, kinesin-8 family members are reportedly multitalented. They can walk on microtubules, but also regulate microtubule length, during mitosis and/or ciliary and flagellar assembly.
PbKIN8B encompasses a classical motor domain positioned centrally [aa 779- 1118] with 8 predicted ATP binding sites [aa 787, 872, 875, 877, 878, 879, 880, 1018] and 3 predicted microtubule interaction sites [aa 1071, 1074, 1077]. With the exception of the kinesin motor domain and of coiled-coil motives in the C-terminal region, no additional protein signatures or nuclear localisation signals (NLS) were detected.

Phenotype
Normal production of male and female gametocytes. No male gamete formation as shown by absence of exflagellation centers.
Strongly reduced fertilisation and ookinete formation. In wild type parasites, the mean ookinete conversion rate as 63.5 ± 3.6, whereas it was only 1.2 ± 1.4 and 0.2± 0.2 for ΔPbkin8B clones 3600 and 3716.
The two ΔPbkin8B mutant cell lines produced very few oocysts (mean range of 1.68/1.36 and 1.4/0.76 respectively) in comparison to wt and Pbkin8B-gfp parasites, where numerous oocysts were formed (mean values the 2 replicates of 180/171 and 187/160 oocysts per midgut respectively. No sporozoite formation observed in oocysts.
No infection of mice by bite of infected mosquitoes.

Additional information
By anlysing a mutant line (RMgm-4683) expressing a GFP tagged version of kinesin-8B the following was shown:
- no expression in blood stages and female gametocytes. In unactivated male gametocytes, cytosolic expression
- Upon activation, the localization of the Pbkin8B-gfp signal changes and is seen as punctiform lines with spatial and temporal dynamics similar to the axonemal marker α-tubulin II. Expression in male gametes.

Evidence is presented that:
- male gametocytes escape from host erythrocyte after activation
- activated male gametocytes replicate their DNA after activation comparable to wild type
- Kinesin-8B is essential for axoneme formation

Other mutants
a mutant line (RMgm-4683) expressing a GFP tagged version of kinesin-8B
 


  Disrupted: Mutant parasite with a disrupted gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_0202700
Gene Model P. falciparum ortholog PF3D7_0111000
Gene productkinesin-8B, putative
Gene product: Alternative name
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/construct used(Linear) plasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedYes
Name of PlasmoGEM construct/vectorPbGEM-267699
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Partial or complete disruption of the geneComplete
Additional remarks partial/complete disruption
Selectable marker used to select the mutant parasitehdhfr/yfcu
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modification
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6