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Type and details of transgene |
Is the transgene Plasmodium derived |
Transgene: not Plasmodium |
Transgene name | GFP |
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Details of the genetic modification |
Inducable system used | No |
Additional remarks inducable system |
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Type of plasmid/construct | Plasmid double cross-over |
PlasmoGEM (Sanger) construct/vector used | No |
Modified PlasmoGEM construct/vector used | No
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Plasmid/construct map |
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Plasmid/construct sequence |
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Restriction sites to linearize plasmid |
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Selectable marker used to select the mutant parasite | hdhfr/yfcu |
Promoter of the selectable marker | pbdhfr |
Selection (positive) procedure | FACS (flowsorting) |
Selection (negative) procedure | No |
Additional remarks genetic modification | To generate the three isogenic, strongly fluorescent reference parasite lines, Bergreen, Beryellow (RMgm-948), and Berred (RMgm-949), that express high levels of GFP, YFP, and mCherry, respectively, the mCherry-3xMyc carboxy-terminal tagging sequence was removed from the original pBAT-SIL6 vector (RMgm-757) by restriction digestion with BlpI and HpaI followed by Klenow fill-in and religation of the plasmid. The resulting vector pBAT-G6 harbors the GFP-expression and recyclable drug-selectable cassettes along with integration sequences targeting the silent, intergenic locus on P. berghei chromosome 6 (see RMgm-757 for details of the pBAT-SIL6 vector). The GFP from the high-expressing fluorescent protein cassette was exchanged for YFP and mCherry to yield pBAT-Y6 and pBAT-M6, respectively. The plasmids were verified by commercial Sanger sequencing and linearized with ApaLI and AhdI before transfection into wild-type P. berghei strain ANKA parasites.
Isolation of fluorescent parasites was performed by FACS-sorting, with the following adaptation to sort in three different channels. We used excitation wavelengths of 488 nm for GFP and YFP and 561 nm for mCherry parasites. Fluorescence was detected using the following band pass filters: GFP, 513/17 nm; YFP, 530/30nm; mCherry, 610/20 nm. |
Additional remarks selection procedure | |
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Other details transgene |
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Promoter |
Gene Model of Parasite |
PBANKA_0711900
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Gene Model P. falciparum ortholog |
PF3D7_0818900
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Gene product | heat shock protein 70 |
Gene product: Alternative name | HSP70 |
Primer information details of the primers used for amplification of the promoter sequence
Primer information details of the primers used for amplification of the promoter sequence
Sequence Primer 1 | |
Additional information primer 1 | |
Sequence Primer 2 | |
Additional information primer 2 | |
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3'-UTR |
Gene Model of Parasite |
PBANKA_1340000
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Gene product | dihydrofolate synthase/folylpolyglutamate synthase, putative |
Gene product: Alternative name | PbDHFS-FPGS |
Primer information details of the primers used for amplification the 3'-UTR sequences
Primer information details of the primers used for amplification the 3'-UTR sequences
Sequence Primer 1 | |
Additional information primer 1 | |
Sequence Primer 2 | |
Additional information primer 2 | |
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Insertion/Replacement locus |
Replacement / Insertion | Replacement locus |
Gene Model of Parasite |
Not available
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Gene product | Not available |
Gene product: Alternative name | |
Primer information details of the primers used for amplification of the target sequences
Primer information details of the primers used for amplification of the target sequences
Sequence Primer 1 | |
Additional information primer 1 | |
Sequence Primer 2 | |
Additional information primer 2 | |
Sequence Primer 3 | |
Additional information primer 3 | |
Sequence Primer 4 | |
Additional information primer 4 | |
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