RMgmDB - Rodent Malaria genetically modified Parasites

Summary

RMgm-879
Malaria parasiteP. berghei
Genotype
DisruptedGene model (rodent): PBANKA_1139800; Gene model (P.falciparum): PF3D7_1363800; Gene product: nuclear fusion protein, putative (GEX1)
Phenotype Fertilization and ookinete; Oocyst; Sporozoite;
Last modified: 8 June 2013, 14:11
  *RMgm-879
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene disruption
Reference (PubMed-PMID number) Reference 1 (PMID number) : 23699412
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone P. berghei ANKA 507cl1 (RMgm-7)
Other information parent lineP.berghei ANKA 507cl1 (RMgm-7) is a reference ANKA mutant line which expresses GFP under control of a constitutive promoter. This reference line does not contain a drug-selectable marker (PubMed: PMID: 16242190).
The mutant parasite was generated by
Name PI/ResearcherNing, J.; Billker, O.; Snell, W.J.
Name Group/DepartmentDepartment of Cell Biology
Name InstituteUniversity of Texas Southwestern Medical School
CityDallas, Texas
CountryUS
Name of the mutant parasite
RMgm numberRMgm-879
Principal namegex1cl1; gex1cl2
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stageNot different from wild type
Gametocyte/GameteNot different from wild type
Fertilization and ookineteSee additional information phenotype
OocystReduced numbers of oocysts. Mutant oocysts had only half the diameter of wild-type cysts on day 7 and, on average, had not grown by day 15. Transmission electron microscopy showed that on day 15, wild-type oocysts were forming sporozoites, while gex1 oocysts either remained small and retained a compact nucleus or became highly vacuolated but invariably failed to show signs of sporogony.
SporozoiteNo sporozoite formation
Liver stageNot tested
Additional remarks phenotype

Mutant/mutation
The mutant lacks expression of GEX1

Protein (function)
PbGEX1 is an ortholog of Chlamydomonas Cre06.g280600 (CrGEX1), a protein that functions in nuclear fusion. It is similar to an Arabidopsis gene, GEX1, previously shown to be involved in gametophyte development and embryogenesis.
CrGEX1 and PbGEX1 are members of a large, previously unrecognized family whose first-characterized member is KAR5 which is a Saccharomyces cerevisiae nuclear envelope protein, essential for nuclear fusion during yeast sexual reproduction

Phenotype
Phenotype analyses indicate a defect of oocyst development. Oocysts either remained small and retained a compact nucleus or became highly vacuolated but invariably failed to show signs of sporogony. Normal numbers of ookinetes are produced. Evidence is presented that DNA synthesis/replication during meiosis in ookinetes is normal, resulting in 4N (tetraploid) ookinetes. Evidence is presented that an uncharacterized event in the nuclear envelope was altered in the mutant zygotes (see 'Additional information').

Additional information
An ultrastructural analysis of ookinetes 18 h after fertilization suggested that meiosis in the mutant zygotes was altered at a step after DNA replication.We detected meiotic spindle poles, marked by electron-dense centriolar plaques on the nuclear envelope, more than twice as frequently in the mutant zygotes as we did in wild-type zygotes. This may indicate that an uncharacterized event in the nuclear envelope was altered in the mutant zygotes.

To localize the GEX1 protein in P. berghei, a triple HA epitope tag was fused to the 3'end of the endogenous gene (see RMgm-880). No protein was detected in asexually replicating blood stages. PbGEX1-HA was detected in a circular pattern surrounding the nucleus of the microgametocyte and macrogametocyte. Circumnuclear staining persisted to the ookinete stage. The gex1/PbGEX1-HA progeny behaved as wild type, demonstrating that the tagged protein was functional. These data indicate that GEX1 is a nuclear envelope protein.

Two independent gex1 knockout cloned lines were generated with a conventional gene targeting vector. For this, two fragments of ;500 bp flanking the coding region were amplified from genomic DNA using primer pairs olSA00021 (GCGCgggcccAAACAATTACAAAAGATAGAA)/olSA00328 (GGGgctagcATTTAACTTATGTTGGCGTG) and olSA000320 (GCGCgaattcGTTCTACATATTTGTTCTTATCG)/olSA000321 (CGCggatccGGTGGTGGTAATATGGCTTAAACG). These fragments were inserted on either side of the tgdhfr/ts expression cassette of plasmid pOB90 (Billker et al. 2004).

Other mutants


  Disrupted: Mutant parasite with a disrupted gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_1139800
Gene Model P. falciparum ortholog PF3D7_1363800
Gene productnuclear fusion protein, putative
Gene product: Alternative nameGEX1
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/construct usedPlasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedYes
Name of PlasmoGEM construct/vectorPbGEM-045681
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Partial or complete disruption of the geneComplete
Additional remarks partial/complete disruption
Selectable marker used to select the mutant parasitehdhfr/yfcu
Promoter of the selectable markersee PlasoGEM
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modificationParasites are transfected with a PlasmoGEM vector (PbGEM-045681)
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6