RMgmDB - Rodent Malaria genetically modified Parasites

Summary

RMgm-869
Malaria parasiteP. berghei
Genotype
Transgene
Transgene Plasmodium: Gene model: PBANKA_1246600; Gene model (P.falciparum): Not available; Gene product: cleft-like protein 1 fam-b protein (CP1; fam-b)
Promoter: Gene model: PBANKA_1133300; Gene model (P.falciparum): PF3D7_1357100; Gene product: elongation factor 1-alpha (eef1a)
3'UTR: Gene model: PBANKA_1010600; Gene product: calmodulin, putative (cam)
Phenotype Asexual bloodstage;
Last modified: 20 May 2013, 20:26
  *RMgm-869
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Introduction of a transgene
Reference (PubMed-PMID number) Reference 1 (PMID number) : 23658610
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone P. berghei ANKA cl15cy1
Other information parent lineA reference wild type clone from the ANKA strain of P. berghei (PubMed: PMID: 17406255).
The mutant parasite was generated by
Name PI/ResearcherHaase, S; de koning-Ward, TF
Name Group/DepartmentSchool of Medicine
Name InstituteDeakin University
CityWaurn Ponds, Victoria
CountryAustralia
Name of the mutant parasite
RMgm numberRMgm-869
Principal namePBANKA_124660-GFP
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationNo
Phenotype
Asexual blood stageExpression of the GFP-tagged protein in blood stages. Localization in the cytoplasm of the red blood cell (punctuate localization)
Gametocyte/GameteNot tested
Fertilization and ookineteNot tested
OocystNot tested
SporozoiteNot tested
Liver stageNot tested
Additional remarks phenotype

Mutant/mutation
The mutant expresses a C-terminal GFP-tagged version of PBANKA_124660 under the control of the constitutive eef1a promoter (and the 3'-UTR of the calmodulin gene). The gfp-tagged gene is introduced on a circular plasmid.

Protein (function)
The protein was selected based on the presence of a PEXEL motif.

Phenotype
Expression of the GFP-tagged protein in blood stages and is exported into the red blood cell (RBC). Localization in the RBC cytoplasm (punctuate localization)

Additional information
PbCP1 harbours an atypical PEXEL motif (RxLxY) and is further characterised by two predicted transmembrane domains (2TMD) in the C-terminal end of the protein.  Evidence is presented that the 2TMD region is required to recruit PbCP1 to discrete membranous structures in the red blood cell cytosol that have a convoluted, vesico-tubular morphology by electron microscopy.

To confirm the localisation of PbCP1, a second transgenic parasite line was generated in which the GFP reporter was replaced with a triplehaemagglutinin/streptavidin tag (3xHA/Strep). IFA of acetone/methanol fixed iRBCs displayed the same export phenotype for PbCP1-3xHA/Strep as observed for the PbCP1-GFP expressing parasite line and immunoblot analysis using anti-HA antibodies revealed a doublet protein band at the predicted MW of ~30 kDa.

Other mutants


  Transgene: Mutant parasite expressing a transgene
Type and details of transgene
Is the transgene Plasmodium derived Transgene: Plasmodium
Gene Model of Parasite PBANKA_1246600
Gene Model P. falciparum ortholog Not available
Gene productcleft-like protein 1 fam-b protein
Gene product: Alternative nameCP1; fam-b
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/constructCircular plasmid
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitetgdhfr
Promoter of the selectable markerpbdhfr
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modificationThe C-terminal gfp-tagged gene is under the control of the constitutive eef1a promoter and the 3'-UTR (392bp) of the calmodulin gene. The gfp-tagged gene is introduced on a circular plasmid.
Primers used to amplify the gene:
F - GCGaggcctATGAGAGTCAGTATTTTAAAATATGTTC
R - GCGcctaggTTTTGGTATTTTTTTTAATTTAAAGTTAC
Additional remarks selection procedure
Other details transgene
Promoter
Gene Model of Parasite PBANKA_1133300
Gene Model P. falciparum ortholog PF3D7_1357100
Gene productelongation factor 1-alpha
Gene product: Alternative nameeef1a
Primer information details of the primers used for amplification of the promoter sequence  Click to view information
Primer information details of the primers used for amplification of the promoter sequence  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
3'-UTR
Gene Model of Parasite PBANKA_1010600
Gene productcalmodulin, putative
Gene product: Alternative namecam
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to view information
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Insertion/Replacement locus
Replacement / InsertionNot available
Gene Model of Parasite Not available
Gene productNot available
Gene product: Alternative name
Primer information details of the primers used for amplification of the target sequences  Click to view information
Primer information details of the primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4