SummaryRMgm-850
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Successful modification | The parasite was generated by the genetic modification |
The mutant contains the following genetic modification(s) | Gene tagging |
Reference (PubMed-PMID number) |
Reference 1 (PMID number) : 23421981 |
MR4 number | |
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Parent parasite used to introduce the genetic modification | |
Rodent Malaria Parasite | P. yoelii |
Parent strain/line | P. y. yoelii 17XNL |
Name parent line/clone | Not applicable |
Other information parent line | |
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The mutant parasite was generated by | |
Name PI/Researcher | Pei Y; Kappe SHI |
Name Group/Department | Seattle Biomedical Research Institute, |
Name Institute | Seattle Biomedical Research Institute, |
City | Seattle |
Country | US |
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Name of the mutant parasite | |
RMgm number | RMgm-850 |
Principal name | Py-ICP-RFA |
Alternative name | |
Standardized name | |
Is the mutant parasite cloned after genetic modification | Yes |
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Phenotype | |
Asexual blood stage | Py-ICP-RFA expressed in blood stages (see below for more information). |
Gametocyte/Gamete | Not tested |
Fertilization and ookinete | Not tested |
Oocyst | Not tested |
Sporozoite | Not tested |
Liver stage | Not tested |
Additional remarks phenotype | Mutant/mutation In addition to a GFP cassette, the RFA tag contained an HA epitope and an E. coli DHFR degradation domain, which destabilizes the protein in the absence of folate analogs, including trimethoprim (TMP) (Muralidharan et al., 2011). Phenotype TMP was administered in the drinking water of mice 24 hrs prior to inoculation with Py-ICP-RFA infected erythrocytes. Two days post infection drug was removed from a subset of mice, while the remaining mice were maintained on TMP for four additional days. Py-ICP-RFA was propagated in SW mice whose water contained 250µg/ml of TMP (Sigma). See RMgm-845 for a mutant expressing a normal ICP and a quadruple C-myc tagged version of ICP. |
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Details of the target gene | |||||||||||||||||||||||||||
Gene Model of Rodent Parasite | PY17X_0816300 | ||||||||||||||||||||||||||
Gene Model P. falciparum ortholog | PF3D7_0911900 | ||||||||||||||||||||||||||
Gene product | falstatin | inhibitor of cysteine proteases | ||||||||||||||||||||||||||
Gene product: Alternative name | ICP; falstatin | ||||||||||||||||||||||||||
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Details of the genetic modification | |||||||||||||||||||||||||||
Name of the tag | RFA tag with an HA epitope and an E. coli DHFR degradation domain (DDD) | ||||||||||||||||||||||||||
Details of tagging | C-terminal | ||||||||||||||||||||||||||
Additional remarks: tagging | |||||||||||||||||||||||||||
Commercial source of tag-antibodies | |||||||||||||||||||||||||||
Type of plasmid/construct | Plasmid single cross-over | ||||||||||||||||||||||||||
PlasmoGEM (Sanger) construct/vector used | No | ||||||||||||||||||||||||||
Modified PlasmoGEM construct/vector used | No | ||||||||||||||||||||||||||
Plasmid/construct map | |||||||||||||||||||||||||||
Plasmid/construct sequence | |||||||||||||||||||||||||||
Restriction sites to linearize plasmid | |||||||||||||||||||||||||||
Selectable marker used to select the mutant parasite | tgdhfr | ||||||||||||||||||||||||||
Promoter of the selectable marker | pbdhfr | ||||||||||||||||||||||||||
Selection (positive) procedure | pyrimethamine | ||||||||||||||||||||||||||
Selection (negative) procedure | No | ||||||||||||||||||||||||||
Additional remarks genetic modification | The regulatable, fluorescent affinity (RFA) tag (Muralidharan et al., 2011) consists of GFPmut2, an E. coli DHFR degradation domain (DDD) and a single HA epitope. A plasmid bearing the RFA tag [kindly provided by Dr. Daniel Goldberg (Washington University School of Medicine, St. Louis, MO)] served as a template for PCR amplification using primers designed with exogenous restriction sites to facilitate its insertion into the pDEF-HsDHFR plasmid (available from the NIAID/ATCC at www.MR4.org, Cat# MRA-774). The product of this ligation is pDEF+RFA. Sequence coding for the C-terminal 207 amino acids (without stop codon) 621 base pairs of the 3’UTR of Py-ICP were PCR amplified from genomic DNA with primers that included exogenous SpeI and NotI restriction sites. These PCR products were combined by splicing by overhang extension SOE PCR, which also introduced an ApaI site between the two products for downstream plasmid linearization prior to transfection (Mikolajczak et al., 2008). This SOE PCR product was digested with NotI and SpeI, and inserted into pDEF+RFA. The resulting plasmid was linearized by digestion with ApaI and transfected by standard methods (Jongco et al., 2006) to yield a double-crossover replacement of the native Py-ICP locus that enabled expression of a C-terminal RFA tag. | ||||||||||||||||||||||||||
Additional remarks selection procedure | |||||||||||||||||||||||||||
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