RMgmDB - Rodent Malaria genetically modified Parasites

Summary

RMgm-5551
Malaria parasiteP. berghei
Genotype
TaggedGene model (rodent): PBANKA_1110700; Gene model (P.falciparum): PF3D7_0511200; Gene product: Stearoyl-CoA desaturase (Scd)
Name tag: triple-HA
Phenotype Asexual bloodstage; Liver stage;
Last modified: 25 September 2024, 10:33
  *RMgm-5551
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene tagging
Reference (PubMed-PMID number) Reference 1 (PMID number) : 38419272
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone Not applicable
Other information parent line
The mutant parasite was generated by
Name PI/ResearcherNarwal SK, Mishra A
Name Group/DepartmentDivision of Molecular Microbiology and Immunology
Name InstituteCSIR-Central Drug Research Institute
CityLucknow
CountryIndia
Name of the mutant parasite
RMgm numberRMgm-5551
Principal nameScd KO
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stageScd was expressed in the blood stage and post 48 h in the liver stage. P. berghei Scd primarily colocalized to the ER in asexual blood stages and partially during liver stages
Gametocyte/GameteNot tested
Fertilization and ookineteNot tested
OocystNot tested
SporozoiteNot tested
Liver stageScd was expressed in the blood stage and post 48 h in the liver stage. P. berghei Scd primarily colocalized to the ER in asexual blood stages and partially during liver stages.
Additional remarks phenotype

Mutant/mutation
The mutant expresses a C-terminal 3xHA-tagged version of Scd.

Protein (function)
The malaria parasite can modify fatty acids, and stearoyl-CoA Δ9-desaturase (Scd) is an enzyme that catalyzes the synthesis of oleic acid by desaturation of stearic acid. Plasmodium parasites can modify de novo synthesized or scavenged fatty acids into long unsaturated fatty acids. An endoplasmic reticulum (ER)-localized stearoyl-CoA desaturase (Scd) was identified in P. falciparum that catalyzes the formation of oleic acid from stearic acid by the insertion of a cis double bond at the Δ9 position of fatty acyl-CoAs.

Phenotype
Analysis of a mutant expressing a C-terminal 3xHA tagged version of Scd showed the following: Scd was expressed in the blood stage and post 48 h in the liver stage. P. berghei Scd primarily colocalized to the ER in asexual blood stages and partially during liver stages.

Analysis of a mutant lacking expression of Scd (RMgm-5550) showed the following:
Scd KO liver stages grow normally but do not form hepatic merozoites. There was abnormal DNA segregation in Scd KO parasites and merozoite formation was abolished.

Additional information

Other mutants


  Tagged: Mutant parasite with a tagged gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_1110700
Gene Model P. falciparum ortholog PF3D7_0511200
Gene productStearoyl-CoA desaturase
Gene product: Alternative nameScd
Details of the genetic modification
Name of the tagtriple-HA
Details of taggingC-terminal
Additional remarks: tagging
Commercial source of tag-antibodies
Type of plasmid/construct(Linear) plasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitehdhfr
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modificationFor the 3XHA tagging of the stearoyl-CoA desaturase (Scd) (PbANKA_1110700) gene, two fragments, F1 (0.773 kb) and F2 (0.584 kb), were amplified from P. berghei genomic DNA. and cloned into the pBC-3XHA-hDHFR vector at XhoI/BglII and NotI/AscI, respectively. The construct was linearized with XhoI/AscI and transfected into P. berghei ANKA schizonts.
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6