RMgmDB - Rodent Malaria genetically modified Parasites

Summary

RMgm-5315
Malaria parasiteP. berghei
Genotype
MutatedGene model (rodent): PBANKA_0823100; Gene model (P.falciparum): PF3D7_0922200; Gene product: S-adenosylmethionine synthetase (SAMS)
Details mutation: The sams gene fused to the destabilizing domain (DD).
Phenotype Asexual bloodstage; Gametocyte/Gamete;
Last modified: 10 August 2023, 16:10
  *RMgm-5315
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene mutation
Reference (PubMed-PMID number) Reference 1 (PMID number) : 37277533
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone Not applicable
Other information parent line
The mutant parasite was generated by
Name PI/ResearcherHarris CT, Kafsack BFC
Name Group/DepartmentDepartment of Microbiology & Immunology
Name InstituteWeill Cornell Medicine
CityNew York
CountryUSA
Name of the mutant parasite
RMgm numberRMgm-5315
Principal namePb-SAMS-DD
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationNo
Phenotype
Asexual blood stageUpon removal of the stabilizing ligand trimethoprim, PbSAMS expression was reduced by 60% in pbsams-dd-ha blood stages and resulted in a two-fold increase in sexual commitment (see also below)
Gametocyte/GameteUpon removal of the stabilizing ligand trimethoprim, PbSAMS expression was reduced by 60% in pbsams-dd-ha blood stages and resulted in a two-fold increase in sexual commitment (see also below)
Fertilization and ookineteNot tested
OocystNot tested
SporozoiteNot tested
Liver stageNot tested
Additional remarks phenotype

Mutant/mutation
The mutant contains a mutated sams gene where the sams gene has been fused to the destabilizing domain (DD) and a HA tag.

Protein (function)
SAMS is the first and rate-limiting enzyme of the methionine cycle. Methionine, among the twenty amino acids, plays an integral role in protein biosynthesis and in regulation of translation and global gene expression - as it is coded by the translation initiation codon. Met is metabolized into S-adenosylmethionine (SAM), the cellular methylation currency, via an ATP-dependent process which is catalyzed by the Plasmodium SAMS enzyme.

Phenotype
Upon removal of the stabilizing ligand trimethoprim, PbSAMS expression was reduced by 60% in pbsams-dd-ha blood stages and resulted in a two-fold increase in sexual commitment (see also below)

Additional information
Stabilization of PbSAMS-DD fusion protein throughout infection was achieved in vivo, by administration of trimethoprim (TMP) to mice (0.25 mg/ml of TMP in drinking water), 2 days prior to infection.

Earlier studies found that, unlike in P. falciparum, supplementation with P-cho precursors had little to no effect on sexual commitment in the rodent malaria parasite Plasmodium berghei. In the context of our  proposed model, where the consumption of SAM by (phosphoethanolamine methyltransferase) PMT provides the link between P-cho precursors and histone methylation, this observation is readily explained by the fact that the PMT ortholog was lost in the rodent malaria parasite lineage (Dechamps et al., J. Lipid Res. 51, 81–96 (2010), thereby decoupling P-cho availability from SAM and SAH abundance in rodent parasites. However, since heterochromatin-mediated silencing of the ap2-g locus also controls sexual commitment in rodent parasites, we hypothesized that commitment in P. berghei would never-the-less remain sensitive to changes in SAM availability. To test this, we generated SAMS knockdown parasites in P. berghei by creating a C-terminal fusion of the endogenous coding sequence with the ecDHFR-based destabilization domain (pbsams-dd-ha). Upon removal of the stabilizing ligand trimethoprim, PbSAMS expression was reduced by 60% in pbsams-dd-ha blood-stages and resulted in a two-fold increase in sexual commitment. This demonstrates that SAM availability regulates the rate of sexual commitment even when decoupled from PtdCho metabolism.

Other mutants


  Mutated: Mutant parasite with a mutated gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_0823100
Gene Model P. falciparum ortholog PF3D7_0922200
Gene productS-adenosylmethionine synthetase
Gene product: Alternative nameSAMS
Details of the genetic modification
Short description of the mutationThe sams gene fused to the destabilizing domain (DD).
Inducable system usedNo
Short description of the conditional mutagenesisNot available
Additional remarks inducable system
Type of plasmid/construct(Linear) plasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitehdhfr
Promoter of the selectable markerunknown
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modificationGeneration of PbSAMS-DD conditional knockdown parasites wild-type P. berghei ANKA strain was obtained from the MR4 repository. P. berghei pbsams-DD parasite line was obtained by double crossover homologous recombination.
The endogenous pbsams locus in the P. berghei ANKA strain background was modified by homologous integration to add the ecDHFR destabilization domain (DD) and hemagglutinin epitope tag (HA) at the 3’ end of the pbsams coding sequence.
Recombinant parasites carrying the human dihydrofolate reductase (hdhfr) gene cassette were 4 positively selected by treatment of mice with pyrimethamine and trimethoprim to stabilize PbSAMS. Stabilization of PbSAMS-DD fusion protein throughout infection was achieved in vivo, by administration of trimethoprim (TMP) to mice (0.25 mg/ml of TMP in drinking water), 2 days prior to infection.
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6