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Details of the target gene |
Gene Model of Rodent Parasite |
PBANKA_1413600
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Gene Model P. falciparum ortholog |
PF3D7_1315100
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Gene product | serine/threonine protein kinase PK9 |
Gene product: Alternative name | |
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Details of the genetic modification |
Inducable system used | No |
Additional remarks inducable system |
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Type of plasmid/construct used | (Linear) plasmid double cross-over |
PlasmoGEM (Sanger) construct/vector used | No |
Modified PlasmoGEM construct/vector used | No
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Plasmid/construct map |
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Plasmid/construct sequence |
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Restriction sites to linearize plasmid |
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Partial or complete disruption of the gene | Complete |
Additional remarks partial/complete disruption |
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Selectable marker used to select the mutant parasite | hdhfr |
Promoter of the selectable marker | eef1a |
Selection (positive) procedure | pyrimethamine |
Selection (negative) procedure | No |
Additional remarks genetic modification | For the deletion of Pk9, a replacement construct was generated as described previously (Mastan et al., 2017). For this, target sequences F8 and F9 were amplified using primers 1016/1017 and 1018/1019 specific for the 5′ or 3′ flanking regions respectively. The F8 (0.62 kb) and F9 (0.62 kb) were cloned in plasmid pBC-GFP-hDHFR at XhoI/ClaI and NotI/AscI restriction sites respectively. The targeting construct was digested with XhoI/AscI |
Additional remarks selection procedure | |
Primer information: Primers used for amplification of the target sequences 
Primer information: Primers used for amplification of the target sequences
Sequence Primer 1 | |
Additional information primer 1 | |
Sequence Primer 2 | |
Additional information primer 2 | |
Sequence Primer 3 | |
Additional information primer 3 | |
Sequence Primer 4 | |
Additional information primer 4 | |
Sequence Primer 5 | |
Additional information primer 5 | |
Sequence Primer 6 | |
Additional information primer 6 | |
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