RMgmDB - Rodent Malaria genetically modified Parasites

Summary

RMgm-5086
Malaria parasiteP. berghei
Genotype
TaggedGene model (rodent): PBANKA_1205000; Gene model (P.falciparum): PF3D7_1006800; Gene product: single-strand telomeric DNA-binding protein GBP2, putative (GBP2, G-strand binding protein 2)
Name tag: mCherry
Phenotype Asexual bloodstage;
Last modified: 26 October 2021, 14:35
  *RMgm-5086
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene tagging
Reference (PubMed-PMID number) Reference 1 (PMID number) : 34604117
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone Not applicable
Other information parent line
The mutant parasite was generated by
Name PI/ResearcherNiikura M, Kobayashi F
Name Group/DepartmentDepartment of Environmental Science, School of Life and Environmental Science
Name InstituteAzabu University
CityKanagawa
CountryJapan
Name of the mutant parasite
RMgm numberRMgm-5086
Principal nameGBP2::mCherry
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stageTo examine the cellular localization of GBP2, we performed live-cell fluorescence imaging of cultured GBP2::mCherry schizonts and infected erythrocytes obtained from mice at 6 h (ring form), 12 h (trophozoite) and 18 h (late trophozoite) post-inoculation with GBP2::mCherry schizonts The mCherry signal was distributed throughout GBP2::mCherry parasite cells at all development stages. GBP2 localized to both the nucleus and cytoplasm of malaria parasites.
Gametocyte/GameteNot tested
Fertilization and ookineteNot tested
OocystNot tested
SporozoiteNot tested
Liver stageNot tested
Additional remarks phenotype

Mutant/mutation
The mutant  expresses a C-terminal mCherry-tagged version of GBP2. The mCherry tag was introduced at the C-terminus of endogenous GBP2. Gbp2::mCherry expression was controlled by the endogenous gbp2 native promoters.

Protein (function)
G-strand binding protein 2 (GBP2) is a Ser/Arg-rich (SR) protein involved in mRNA surveillance and nuclear mRNA quality control in yeast. PfGBP2 (PF3D7_1006800) has homology to yeast GBP2 and is highly expressed during the blood stages of malaria parasites. GBP2 of Plasmodium spp. contains two RNA recognition motif (RRM) domains (RRM1 and RRM2) and is conserved among eukaryotes. RRM1 and RRM2 of yeast GBP2 recognize RNA. RRM2 of yeast GBP2 contains a WQxLKD motif, which is directly involved in RNA recognition. Plasmodium RRM2 contains a WKELKD motif, which is similar to the WQxLKD motif. In contrast, RRM3 (the C-terminal RRM domain of yeast) was absent in Plasmodium spp.

Phenotype
A mutant lacking expression of GBP2 (RMgm-4707) showed a (strongly) reduced production of male and female gametocytes.

To examine the cellular localization of GBP2, we performed live-cell fluorescence imaging of cultured GBP2::mCherry schizonts and infected erythrocytes obtained from mice at 6 h (ring form), 12 h (trophozoite) and 18 h (late trophozoite) post-inoculation with GBP2::mCherry schizonts The mCherry signal was distributed throughout GBP2::mCherry parasite cells at all development stages. GBP2 localized to both the nucleus and cytoplasm of malaria parasites.  

Additional information
To investigate which proteins interact with GBP2, we performed protein IP using anti-mCherry beads and identified the proteins bound to GBP2 by MS. The results of IP-MS  of GBP2::mCherry imply that GBP2 interacts with ALBA4, DOZI and CITH. DOZI and CITH are required for zygote development but not for gametocytogenesis.
To identify RNAs bound by GBP2 ,we performed RIPseq on mature schizonts- and gametocytes-lysates using antimCherry beads and sequenced the RNAs bound to GBP2 Our RIP-seq results revealed that GBP2 bound to mRNAs encoding proteins that are essential for asexual development; however, the parasitemia course was comparable in mice infected with Dgbp2 versus control parasites. These findings imply that a factor other than GBP2 is involved in the export of these mRNAs.

Other mutants


  Tagged: Mutant parasite with a tagged gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_1205000
Gene Model P. falciparum ortholog PF3D7_1006800
Gene productsingle-strand telomeric DNA-binding protein GBP2, putative
Gene product: Alternative nameGBP2, G-strand binding protein 2
Details of the genetic modification
Name of the tagmCherry
Details of taggingC-terminal
Additional remarks: tagging
Commercial source of tag-antibodies
Type of plasmid/construct(Linear) plasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitehdhfr
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modificationTo generate transgenic parasites expressing mCherry-fused GBP2 or mCherry-fused NAB2, the gene-targeting vectors for gbp2 (PBANKA_120500) or nab2 (PBANKA_1122000) were prepared by PCR. The PCR products were annealed to either side of the red fluorescent protein gene (mCherry)-hdhfr expressing cassette and amplified by PCR using gene-specific primers. The gene targeting vectors were introduced into the 3’ flanking regions of ORFs of target genes by double-crossover homologous recombination
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6