RMgmDB - Rodent Malaria genetically modified Parasites

Summary

RMgm-5035
Malaria parasiteP. berghei
Genotype
TaggedGene model (rodent): PBANKA_1418100; Gene model (P.falciparum): PF3D7_1319600; Gene product: ACDC domain-containing protein, putative (AP2R-2 (AP2 Transcription Factor-related gene 2))
Name tag: mNeonGreen
Phenotype Gametocyte/Gamete;
Last modified: 7 July 2021, 14:20
  *RMgm-5035
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene tagging
Reference (PubMed-PMID number) Reference 1 (PMID number) : 34119684
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone Not applicable
Other information parent line
The mutant parasite was generated by
Name PI/ResearcherYuda M, Nishi T
Name Group/DepartmentDepartment of Medical Zoology
Name InstituteMie University School of Medicine
CityMie, Tsu
CountryJapan
Name of the mutant parasite
RMgm numberRMgm-5035
Principal nameAP2R-2-mNeonGreen
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stageNot different from wild type
Gametocyte/GameteFluorescence microscopy using transgenic parasites expressing AP2R-1 as a mNeonGreen-tagged protein showed that it is expressed in the nucleus of female gametocytes.
Fertilization and ookineteNot tested
OocystNot tested
SporozoiteNot tested
Liver stageNot tested
Additional remarks phenotype

Mutant/mutation
The mutant expresses a C-terminal mNeonGreen-tagged version of AP2R-2

Protein (function)
Through a screen, a gene with a domain related to Plasmodium AP2 family proteins (PBANKA_1418100) was identified. This domain is conserved at the C-terminus of eight Plasmodium AP2 family proteins, named ACDC (AP2-coincident domain mainly at the C-terminus) domain. This gene, hereafter referred to as AP2 TF- related gene 2 (AP2R-2) also possesses the domain at the C-terminus of the encoded protein but lacks AP2 domains. 

Phenotype

Fluorescence microscopy using transgenic parasites expressing AP2R-1 as a mNeonGreen-tagged protein showed that it is expressed in the nucleus of female gametocytes.

Additional information

From the Abstract:

'Fluorescence microscopy showed that AP2-G expression was first observed in the parasite 12 h after erythrocyte invasion and peaked at 18 h when sexual features were first manifested in  early gametocytes. Expression of  AP2-G decreased with manifestation of  sex-specific features. Chromatin immunoprecipitation followed by sequencing (ChIP-seq) was performed at peak AP2-G expression and identified over 1000 binding sites in the genome. The main binding motif of the TF predicted from the binding sites was GTACNY. Predicted targets contained a number of genes related to protein biogenesis, suggesting that AP2-G plays a role in establishing a cellular basis required for sexual differentiation. AP2-G binding sites also existed upstream of gametocyte-specific TFs, namely AP2-G2, AP2-FG, and AP2-G itself. Furthermore, the target contained two AP2 TF-related genes. Disruption of  these genes resulted in  the arrest of  ookinete development. These results suggest another role of  AP2-G: activating a  transcriptional cascade to  promote conversion into early gametocytes.'

Other mutants


  Tagged: Mutant parasite with a tagged gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_1418100
Gene Model P. falciparum ortholog PF3D7_1319600
Gene productACDC domain-containing protein, putative
Gene product: Alternative nameAP2R-2 (AP2 Transcription Factor-related gene 2)
Details of the genetic modification
Name of the tagmNeonGreen
Details of taggingC-terminal
Additional remarks: tagging
Commercial source of tag-antibodies
Type of plasmid/construct(Linear) plasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitehdhfr
Promoter of the selectable markerunknown
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modification
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6