RMgmDB - Rodent Malaria genetically modified Parasites

Summary

RMgm-4996
Malaria parasiteP. berghei
Genotype
MutatedGene model (rodent): PBANKA_1446100; Gene model (P.falciparum): Pf3D7_ 1231400; Gene product: membrane protein ICM1 (ICM1)
Details mutation: 'promoter swap mutant': the promoter of icm1 replaced with the clag9 promoter (PBANKA_140060).
Phenotype Gametocyte/Gamete;
Last modified: 18 May 2021, 18:32
  *RMgm-4996
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene mutation
Reference (PubMed-PMID number) Reference 1 (PMID number) : 33762339
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone P. berghei ANKA 2.34
Other information parent lineP. berghei ANKA 2.34 is a cloned, gametocyte producer line of the ANKA strain (PubMed: PMID: 15137943).
The mutant parasite was generated by
Name PI/ResearcherBalestra AC, Brochet M
Name Group/DepartmentDepartment of Microbiology and Molecular Medicine, Faculty of Medicine
Name InstituteUniversity of Geneva
CityGeneva
CountrySwitzerland
Name of the mutant parasite
RMgm numberRMgm-4996
Principal nameP(clag)ICM1
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stageNot different from wild type
Gametocyte/GameteRT-PCR analysis confirmed a two-fold reduction in pbicm1 expression in purified P(clag)ICM1 gametocytes. Although P(clag)ICM1 gametocytes were microscopically indistinguishable from their wild-type (WT) counterparts, they did not form active exflagellation centers upon activation. PbICM1 down-regulation led to significant decreases in axoneme formation, egress from the host RBC, and DNA replication, indicating an early requirement for PbICM1 in male gametogenesis.
A strongly attenuated calcium mobilization was consistently observed in P(clag)ICM1
Fertilization and ookineteNot tested
OocystNot tested
SporozoiteNot tested
Liver stageNot tested
Additional remarks phenotype

Mutant/mutation
In the 'promoter swap mutant': the promoter of icm1 has been replaced with the asexual blood stage promoter clag9 (PBANKA_140060). This promoter is active in asexual blood stages but not in gametocytes.

Protein (function)
See additional information below.

Phenotype
RT-PCR analysis confirmed a two-fold reduction in pbicm1 expression in purified PclagCM1 gametocytes. Although PclagICM1 gametocytes were microscopically indistinguishable from their wild-type (WT) counterparts, they did not form active exflagellation centers upon activation. PbICM1 down-regulation led to significant decreases in axoneme formation, egress from the host RBC, and DNA replication, indicating an early requirement for PbICM1 in male gametogenesis.
A strongly attenuated calcium mobilization was consistently observed in PclagICM1

Additional information
From the paper:
'We identify a multipass membrane protein, termed important for calcium mobilization-1 (ICM1; Pf3D7_1231400) that interacts with and is phosphorylated by PKG in two different Plasmodium developmental stages and species. Through stage-specific knockdown and reverse genetic approaches, we show that ICM1 is essential for calcium mobilization in both the clinically relevant asexual blood stages and in gametocytes that mediate transmission to mosquitoes. Our findings highlight this putative transporter or channel as a crucial link between PKG function and calcium signaling'.
PKG is involved in release of merozoites from red blood cells and hepatocytes, induction of gametogenesis and parasite transmission upon ingestion of gametocytes by a blood-feeding mosquito, and sustaining cellular motility necessary for parasite dissemination. A major function of PKG in all these processes is the tightly regulated mobilization of calcium from intracellular stores within seconds of activation

In the paper evidence is presented that:
- ICM1 may represent a structurally divergent polytopic membrane protein with architectural similarities to mammalian channels, transporters, and IP3 receptors. 
- ICM1 is phosphorylated in a PKG-dependent manner 
- Stage-specific knockdown of PbICM1 reveals a crucial role in early calcium mobilization required to initiate gametogenesis

Analysis of a mutant expressing HA-tagged ICM1 (RMgm-4993) showed the following:
No signal was observed for PbICM1-HA3 in Western blot analysis of schizont or gametocyte extracts from this line, possibly due to low abundance of PbICM1. Consistent with this observation, no specific immunofluorescence signal could be observed in both schizonts and gametocytes. Nevertheless, immunoprecipitation (IP) of PbICM1-HA3 from extracts of both schizonts and gametocytes recovered multiple peptides, identified by MS to encompass up to 28% coverage of PbICM1. As expected, based on the PbPKG IPs, PbPKG was the most enriched protein coimmunoprecipitated with PbICM1-HA3 in both stages. Notably, no peptides from PbCDPK1 or PbCDPK4 were recovered from either immuno-precipitate, confirming that these kinases do not interact with PbPKG or PbICM1 as previously suggested.

Other mutants


  Mutated: Mutant parasite with a mutated gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_1446100
Gene Model P. falciparum ortholog Pf3D7_ 1231400
Gene productmembrane protein ICM1
Gene product: Alternative nameICM1
Details of the genetic modification
Short description of the mutation'promoter swap mutant': the promoter of icm1 replaced with the clag9 promoter (PBANKA_140060).
Inducable system usedNo
Short description of the conditional mutagenesisNot available
Additional remarks inducable system
Type of plasmid/construct(Linear) plasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitehdhfr
Promoter of the selectable markerpbdhfr
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modificationTo generate the P(ama1)ICM1 line, the plasmid pOB116-ama1 was used (RMgm-773). The first 1000 bp from PbICM1 gene was amplified from gDNA using the primers 453 and 458. The PCR product was digested with Xho I and Not I and ligated into the pOB116-ama1 plasmid previously digested with the same enzymes, resulting in the plasmid pAB025. The last 750 bp of PbICM1 5′UTR were amplified using primers 459 and 464, and the resulting fragment was digested with Hind III and Pst I and ligated into pAB026 previously digested with the same enzymes. The same strategy was used to generate the line Pclag9ICM1, with the plasmid pOB116-clag9 resulting in plasmid pAB027. Both plasmids were digested with the enzymes Eco RV and Hind III to be transfected in P. berghei.
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6