RMgmDB - Rodent Malaria genetically modified Parasites

Summary

RMgm-4872
Malaria parasiteP. berghei
Genotype
TaggedGene model (rodent): PBANKA_0304800; Gene model (P.falciparum): PF3D7_0207400; Gene product: serine repeat antigen 7 (serine repeat antigen 7, SERA7, SERA4)
Name tag: mCherry
Transgene
Transgene not Plasmodium: GFP (gfp-mu3)
Promoter: Gene model: PBANKA_1133300; Gene model (P.falciparum): PF3D7_1357100; Gene product: elongation factor 1-alpha (eef1a)
3'UTR: Gene model: PBANKA_0719300; Gene product: bifunctional dihydrofolate reductase-thymidylate synthase, putative (dhfr/ts)
Replacement locus: Gene model: PBANKA_0306000; Gene product: 6-cysteine protein (230p)
Phenotype Asexual bloodstage; Gametocyte/Gamete; Sporozoite; Liver stage;
Last modified: 23 September 2020, 14:33
  *RMgm-4872
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene tagging, Introduction of a transgene
Reference (PubMed-PMID number) Reference 1 (PMID number) : 32956401
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone P. berghei ANKA 507cl1 (RMgm-7)
Other information parent lineP.berghei ANKA 507cl1 (RMgm-7) is a reference ANKA mutant line which expresses GFP under control of a constitutive promoter. This reference line does not contain a drug-selectable marker (PubMed: PMID: 16242190).
The mutant parasite was generated by
Name PI/ResearcherPutrianti ED, Heussler V, Ingmundson A
Name Group/DepartmentParasitology Unit
Name InstituteMax Planck Institute for Infection Biology
CityBerlin
CountryGermany
Name of the mutant parasite
RMgm numberRMgm-4872
Principal namePbSERA4-mCherry
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stagePbSERA4-mCherry signal in late asexual blood stages
Gametocyte/GametePbSERA4-mCherry signal in gametocytes, and red fluorescence throughout exflagellation of male gametes.
Fertilization and ookineteNot tested
OocystNot tested
SporozoiteNo mCherry signal
Liver stageNo mCherry signal could be detected in early liver-stage P. berghei. However fluorescent protein expression in both lines is evident later in the liver stage. PbSERA4-mCherry could be detected 48 hours after infection of cultured cells with PbSERA4-mCherry sporozoites. The PbSERA4-mCherry signal progressively increased, and late liver schizonts and liver merozoites exhibited bright fluorescence
Additional remarks phenotype

Mutant/mutation
The mutant lacks expresses a C-terminal mCherry-tagged version of SERA4 and expresses GFP under the constitutive eef1a promoter

Protein (function)
The Plasmodium berghei PbSERA4 (PBANKA_0304800) gene encodes a cysteine-type SERA and is conserved and syntenic across the primate and rodent Plasmodium species. The predicted orthologue of PbSERA4 in Plasmodium falciparum is PfSERA7 (PF3D7_0207400), and the proteins encoded by these genes are 44% identical and 57% similar. Within the signature papain family cysteine protease domain (PFAM: PF00112), PbSERA4 and PfSERA7 share 66% amino acid identity and include the strictly conserved catalytic residues, i.e. an amino-terminal glutamine, the catalytic cysteine residue, a central histidine, and a carboxy-terminal asparagine.

Phenotype
Analyses of a mutant lacking expression of SERA4 (RMgm-4871) provided evidence that that liver-stage Pbsera4(-) parasites are released inefficiently from infected hepatocytes, but that they are infectious to red blood cells.

Analyses of the mutant expressing mCherry-tagged SERA 4 showed:
'We detected PbSERA4-mCherry signal in late asexual blood stages and gametocytes, and we could observe red fluorescence throughout exflagellation of male gametes. We failed to detect a red fluorescent signal in PbSERA4-mCherry sporozoites isolated from mosquito midguts or salivary glands despite the presence of PbSERA4 transcripts. No mCherry signal could be detected in early liver-stage P. berghei. However fluorescent protein expression in both lines is evident later in the liver stage. PbSERA4-mCherry could be detected 48 hours after infection of cultured cells with PbSERA4-mCherry sporozoites. The PbSERA4-mCherry signal progressively increased, and late liver schizonts and liver merozoites exhibited bright fluorescence'. 

Additional information

Other mutants


  Tagged: Mutant parasite with a tagged gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_0304800
Gene Model P. falciparum ortholog PF3D7_0207400
Gene productserine repeat antigen 7
Gene product: Alternative nameserine repeat antigen 7, SERA7, SERA4
Details of the genetic modification
Name of the tagmCherry
Details of taggingC-terminal
Additional remarks: tagging
Commercial source of tag-antibodies
Type of plasmid/construct(Linear) plasmid single cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitetgdhfr
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modification
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6

  Transgene: Mutant parasite expressing a transgene
Type and details of transgene
Is the transgene Plasmodium derived Transgene: not Plasmodium
Transgene nameGFP (gfp-mu3)
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/construct(Linear) plasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitegfp (FACS)
Promoter of the selectable markereef1a
Selection (positive) procedureFACS (flowsorting)
Selection (negative) procedureNo
Additional remarks genetic modificationThe GFP gene (1 copy) has been inserted into the 230p locus (PBANKA_030600) by double cross-over integration.
Additional remarks selection procedureThis reporter mutant expressing GFP does not contain a drug-selectable marker. This mutant has been selected by FACS sorting after transfection based on GFP fluorescence.
Other details transgene
Promoter
Gene Model of Parasite PBANKA_1133300
Gene Model P. falciparum ortholog PF3D7_1357100
Gene productelongation factor 1-alpha
Gene product: Alternative nameeef1a
Primer information details of the primers used for amplification of the promoter sequence  Click to view information
Primer information details of the primers used for amplification of the promoter sequence  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
3'-UTR
Gene Model of Parasite PBANKA_0719300
Gene productbifunctional dihydrofolate reductase-thymidylate synthase, putative
Gene product: Alternative namedhfr/ts
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to view information
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Insertion/Replacement locus
Replacement / InsertionReplacement locus
Gene Model of Parasite PBANKA_0306000
Gene product6-cysteine protein
Gene product: Alternative name230p
Primer information details of the primers used for amplification of the target sequences  Click to view information
Primer information details of the primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4