RMgmDB - Rodent Malaria genetically modified Parasites

Summary

RMgm-1416
Malaria parasiteP. berghei
Genotype
Genetic modification not successful
TaggedGene model (rodent): PBANKA_1210300; Gene model (P.falciparum): PF3D7_1011900; Gene product: heme oxygenase (HO; heam oxygenase)
Name tag: GFP
PhenotypeNo phenotype has been described
Last modified: 29 February 2016, 18:56
  *RMgm-1416
Successful modificationThe gene/parasite could not be changed/generated by the genetic modification.
The following genetic modifications were attempted Gene tagging
Number of attempts to introduce the genetic modification Unknown
Reference (PubMed-PMID number) Reference 1 (PMID number) : 26915471
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone P. berghei ANKA 2.34
Other information parent lineP. berghei ANKA 2.34 is a cloned, gametocyte producer line of the ANKA strain (PubMed: PMID: 15137943)
Attempts to generate the mutant parasite were performed by
Name PI/ResearcherAlves E; Tewari R; Garcia CR
Name Group/DepartmentNúcleo de Pesquisa em Sinalização Celular Patógeno-Hospedeiro (NUSCEP)
Name InstituteDepartamento de Fisiologia, Instituto de Biociências, Universidade de São Paulo
CitySão Paulo
CountryBrazil

  Tagged: Mutant parasite with a tagged gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_1210300
Gene Model P. falciparum ortholog PF3D7_1011900
Gene productheme oxygenase
Gene product: Alternative nameHO; heam oxygenase
Details of the genetic modification
Name of the tagGFP
Details of taggingC-terminal
Additional remarks: tagging
Commercial source of tag-antibodies
Type of plasmid/construct(Linear) plasmid single cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitehdhfr
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modificationThe unsuccessful attempt(s) to tag this gene with GFP indicates an essential role for asexual blood stage growth/multiplication. Attempt(s) to disrupt the gene were also unsuccessful (see RMgm-1415)

Most mammalian cells use a different strategy to nullify haem toxicity by converting it to biliverdin (BV), a step catalysed by haem oxygenase (HO). The malaria parasite converts haem into the chemically inert haemozoin to avoid toxicity.

To tag the endogenous locus with GFP, we generated a pbHO-GFP construct by single crossover homologous recombination. An 876-bp region coding for the C-terminus of PbHO without the stop codon was inserted in-frame and upstream of the GFP sequence in plasmid p277 containing the human DHFR cassette and conveying resistance to pyrimethamine, as previously described49. The primers used to amplify this fragment are provided below: CCCCGGTACCGTAGAGATTATATTTACCATCTTGAAG, T1031; CCCCGGGCCCTTTTTTTATATTTTCAAAATGTTTTGTCAAAATCATC, T1032. Prior to transfection, the final construct was digested with Bsm1, which cuts the plasmid in the middle of the insert.
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6