RMgmDB - Rodent Malaria genetically modified Parasites

Summary

RMgm-1135
Malaria parasiteP. berghei
Genotype
DisruptedGene model (rodent): PBANKA_1110500; Gene model (P.falciparum): PF3D7_0511000; Gene product: translationally-controlled tumor protein homolog | histamine-releasing factor (Histamine releasing factor (HRF))
Transgene
Transgene not Plasmodium: GFP (gfp-mu3)
Promoter: Gene model: PBANKA_1133300; Gene model (P.falciparum): PF3D7_1357100; Gene product: elongation factor 1-alpha (eef1a)
3'UTR: Gene model: PBANKA_0719300; Gene product: bifunctional dihydrofolate reductase-thymidylate synthase, putative (dhfr/ts)
Replacement locus: Gene model: PBANKA_0306000; Gene product: 6-cysteine protein (230p)
Phenotype Liver stage;
Last modified: 26 October 2014, 11:09
  *RMgm-1135
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene disruption, Introduction of a transgene
Reference (PubMed-PMID number) Reference 1 (PMID number) : 25329441
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone P. berghei ANKA 507cl1 (RMgm-7)
Other information parent lineP.berghei ANKA 507cl1 (RMgm-7) is a reference ANKA mutant line which expresses GFP under control of a constitutive promoter. This reference line does not contain a drug-selectable marker (PubMed: PMID: 16242190).
The mutant parasite was generated by
Name PI/ResearcherMathieu, C; Menard, R; Mecheri, S
Name Group/DepartmentUnité de Biologie des Interactions Hôte Parasites
Name InstituteInstitut Pasteur
CityParis
CountryFrance
Name of the mutant parasite
RMgm numberRMgm-1135
Principal nameHRFΔ1-3
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stageNot different from wild type
Gametocyte/GameteNot different from wild type
Fertilization and ookineteNot different from wild type
OocystNot different from wild type
SporozoiteNot different from wild type
Liver stageSporozoites did not display any detectable defect in gliding motility, host cell traversal or host cell invasion of HepG2 cells.
HRFΔ1 and WT developed indistinguishably inside HepG2 cells into exo-erythrocytic forms (EEF, liver stages). Therefore, HRF does not appear to be important for a basic parasite developmental step detectable in vitro.
To test pre-erythrocytic stage infectivity, sporozoites were inoculated into mice by mosquito bite, intradermal or intravenous injection and emergence of blood-stage parasites monitored by FACS. Only 40 to 50% of animals became infected after injection of HRFΔ1 sporozoites when 100% animals were infected after injection of WT parasites. Animals became patent with HRFΔ1 blood-stage parasites on average 2 to 3 days after the WT following infection by mosquito bites or inoculation of isolated sporozoites, corresponding to a 100 to 1000-fold decrease in infectivity of mutant parasites.
Additional remarks phenotype

Mutant/mutation
The mutant lacks expression of HRF/TCTP and expresses GFP under the constitutive eef1a promoter.

Protein (function)
Histamine releasing factor (HRF), originally classified as a tumor protein (translationally controlled tumor protein, TCTP) in mouse erythroleukemia, is found in a wide range of eukaryotes including yeast, plants and animals. The name TCTP was coined as a consequence of cDNA cloning from a human mammary carcinoma and based on the fact that TCTP is regulated at the translational level. HRF plays many different functions and is involved in many physiological processes such as cell proliferation, stress and heat shock responses, and cell death. As an intracellular product, HRF has a calcium and tubulin binding properties and has been shown to transiently associate with microtubules during cell cycle. As a calcium-binding protein HRF was found to be up-regulated in response to a loss of calcium homeostasis which could be part of a role of HRF in general stress response.
As a secreted product, HRF has immuno-modulatory roles. In humans, HRF induces the release of histamine and modulates cytokine secretion from basophils, eosinophils, and T cells. HRF stimulates eosinophils to produce IL-8, induces secretion of IL-4 and IL-13 from basophils and inhibits IL-2, IL-4, and IL-13 production from stimulated primary T cells (Vonakis et al., 2003). Recently, HRF was found to have an inflammatory role in mouse models of asthma and allergy and to exist as a dimer bound to a subset of IgE and IgG antibodies, suggesting the possibility for HRF to cross-link IgE on the surface of basophils and mast cells.
HRF is also expressed by a number of eukaryotic parasites, including Plasmodium.
Plasmodium HRF, which has a high homology to human HRF (their amino acid sequences are 33% identical and 54% similar) has been proposed to play an important role during the erythrocytic phase of malarial infection (MacDonald et al., 2001).

Phenotype
Phenotype analyses indicate that the absence of HRF does not influence blood stage growth/multiplication and experimental cerebral complications (ECM in C57Bl6 mice).The absence of HRF appears not to affect sporozoite production, motility and infectivity and development of liver stages in vitro.
Evidence is presented that.the absence of HRF results in lower (~2,5x) parasite liver loads in vivo (see also 'Additional Information' below).

Additional information
Evidence is presented for HRF expression in liver stages (using anti-HRF antibodies).
Evidence is presented that the lack of HRF increases IL-6 production in the infected liver.
Evidence is presented that the lack of HRF impact on host (immune) cell recruitment in the infected liver.
Based on these observations it is concluded 'parasite HRF is thus used to down-regulate a cytokine (IL-6) with anti-parasite activity'.

Other mutants


  Disrupted: Mutant parasite with a disrupted gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_1110500
Gene Model P. falciparum ortholog PF3D7_0511000
Gene producttranslationally-controlled tumor protein homolog | histamine-releasing factor
Gene product: Alternative nameHistamine releasing factor (HRF)
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/construct used(Linear) plasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Partial or complete disruption of the geneComplete
Additional remarks partial/complete disruption
Selectable marker used to select the mutant parasitehdhfr
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modification
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 15’- cgcgggcccgcgcattattaccgttgtca -3’
Additional information primer 1ApaI-5’UTR-PbHRF-F
Sequence Primer 25’- cgcctgcagggcttatgcaagtatcgaacaa -3’
Additional information primer 2PstI-5’UTR-PbHRF-R
Sequence Primer 35’- cgcggtaccttgctacatgacgcataaacc -3’
Additional information primer 3KpnI-3’UTR-PbHRF-F
Sequence Primer 45’- cgcgaattctgtgaaatcgacaatgttttgg -3’
Additional information primer 4EcoRI-3’UTR-PbHRF-R
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6

  Transgene: Mutant parasite expressing a transgene
Type and details of transgene
Is the transgene Plasmodium derived Transgene: not Plasmodium
Transgene nameGFP (gfp-mu3)
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/construct(Linear) plasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitegfp (FACS)
Promoter of the selectable markereef1a
Selection (positive) procedureFACS (flowsorting)
Selection (negative) procedureNo
Additional remarks genetic modificationThe GFP gene (1 copy) has been inserted into the 230p locus (PBANKA_030600) by double cross-over integration.
Additional remarks selection procedureThis reporter mutant expressing GFP does not contain a drug-selectable marker. This mutant has been selected by FACS sorting after transfection based on GFP fluorescence.
Other details transgene
Promoter
Gene Model of Parasite PBANKA_1133300
Gene Model P. falciparum ortholog PF3D7_1357100
Gene productelongation factor 1-alpha
Gene product: Alternative nameeef1a
Primer information details of the primers used for amplification of the promoter sequence  Click to view information
Primer information details of the primers used for amplification of the promoter sequence  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
3'-UTR
Gene Model of Parasite PBANKA_0719300
Gene productbifunctional dihydrofolate reductase-thymidylate synthase, putative
Gene product: Alternative namedhfr/ts
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to view information
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Insertion/Replacement locus
Replacement / InsertionReplacement locus
Gene Model of Parasite PBANKA_0306000
Gene product6-cysteine protein
Gene product: Alternative name230p
Primer information details of the primers used for amplification of the target sequences  Click to view information
Primer information details of the primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4