RMgmDB - Rodent Malaria genetically modified Parasites

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Summary

RMgm-361
Malaria parasiteP. berghei
Genotype
DisruptedGene model (rodent): PBANKA_1217700; Gene model (P.falciparum): PF3D7_0320800; Gene product: ATP-dependent RNA helicase DDX6 (DOZI, protein development of zygote inhibited)
Transgene
Transgene not Plasmodium: RFP
Promoter: Gene model: PBANKA_1319500; Gene model (P.falciparum): PF3D7_1455800; Gene product: LCCL domain-containing protein (LAP4; LCCL/lectin adhesive-like protein 4; CCp2)
3'UTR: Gene model: PBANKA_1359600; Gene product: transmission blocking target antigen precursor 6-cysteine protein (P48/45)
Replacement locus: Gene model: PBANKA_0306000; Gene product: 6-cysteine protein (230p)
Transgene
Transgene not Plasmodium: GFP (gfp-mut3)
Promoter: Gene model: PBANKA_0416100; Gene model (P.falciparum): PF3D7_0905300; Gene product: dynein heavy chain, putative
3'UTR: Gene model: PBANKA_1010600; Gene product: calmodulin, putative (cam)
Replacement locus: Gene model: PBANKA_0306000; Gene product: 6-cysteine protein (230p)
Phenotype Gametocyte/Gamete; Fertilization and ookinete;
Last modified: 21 February 2010, 13:42
  *RMgm-361
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene disruption, Introduction of a transgene, Introduction of a transgene
Reference (PubMed-PMID number) Reference 1 (PMID number) : 20169188
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone P. berghei ANKA 820cl1m1cl1 (RMgm-164)
Other information parent lineP. berghei ANKA 820cl1m1cl1 (RMgm-164) is a reference ANKA mutant line which expresses GFP under control of a male and RFP under control of a female gametocyte specific promoter (PubMed: PMID: 19438517)
The mutant parasite was generated by
Name PI/ResearcherG.R. Mair, C.J. Janse, A.P. Waters
Name Group/DepartmentLeiden Malaria Research Group
Name InstituteLeiden University Medical Center (LUMC)
CityLeiden
CountryThe Netherlands
Name of the mutant parasite
RMgm numberRMgm-361
Principal name927cl1
Alternative nameΔpbdozi
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stageNot different from wild type
Gametocyte/GameteNormal production of gametocytes and gametes. A complete block of development of fertilized female gametes (zygotes) into mature ookinetes. Northern analysis of mRNA of gametocytes showed a nearly complete loss of transcripts (mRNA) of genes that are translationally repressed (for example genes encoding the ookinete surface proteins P25, P28). Microarray analysis of mRNA of gametocytes showed a significant reduction (> 2x) of transcripts of 370 genes; including seven of nine genes previously shown to be translationally repressed.
Fertilization and ookineteNormal production of gametocytes and gametes (see also phenotype 'Gametocyte/gamete'). A complete block of development of fertilized female gametes (zygotes) into mature ookinetes. Normal development into ookinetes requires meiotic DNA replication in the zygote 2-3 hours after fertilization of female gametes. In the mutant, all zygotes aborted development before meiosis.
OocystNot tested
SporozoiteNot tested
Liver stageNot tested
Additional remarks phenotype

Mutant/mutation
The mutant lacks expression of DOZI (protein development of zygote inhibited; ATP-dependent RNA helicase, putative) and expresses GFP under control of a male and RFP under control of a female gametocyte specific promoter.

Protein (function)
DOZI is an RNA helicase that is highly up-regulated in female gametocytes and shows high sequence homology to the DDX6 family of RNA helicases.  It contains domains involved in RNA-binding and RNA-unwinding activity.  In other eukaryotes the DDX6 family of DEAD-box RNA helicases is tightly linked both to storage of mRNAs encoding proteins associated with progression through meiosis into translationally silent mRNPs and with the transport of mRNA to degradation centers in the cell (P-bodies). These helicases are found in organisms as diverse as yeast (e.g., Dhh1p) and humans (e.g., RCK/p54).

Phenotype
The phenotype analyses indicate an essential role of DOZI in the development of fertilized female gametes (zygotes).
The phenotype analyses indicate that DOZI has a central role in the silencing and maintenance of steady-state levels of a population of gametocyte-specific transcripts. The loss of DOZI severely affected the capacity of the parasite to store and stabilize a discrete subset of mRNAs in the female gametocyte, resulting in a failure to synthesize specific proteins and to complete normal zygote development.  Translational repression of transcripts encoding these proteins in Plasmodium may function to specifically regulate gene expression during meiosis in the zygote.

Additional information
The dozi gene has been disrupted in a reporter line (RMgm-164) expressing GFP under control of a male and RFP under control of a female gametocyte specific promoter. This reporter line mutant can used to determine fertilisation of female gametes and meiosis in zygotes by FACS analysis. Female gametes/zygotes express RFP allowing for FACS selection of the RFP-positive females to be analysed. Before FACS analysis live cells are stained with the DNA specific dye Hoechst 32258 to measure DNA content and determine the ploïdy of female cells by FACS analysis (Ponzi, M. et al., 2009, Cell. Microbiol 11, 1272-88).

DOZI is also produced in male gametocytes, although in much lower abundance than in females. Male and female gametes of pbdozi have been crossed with gametes of mutant parasite lines that are defective in male or in female gamete production (see RMgm-100). These cross-fertilization assays revealed that male pbdozi gametes were able to fertilize wild-type DOZI-expressing female gametes, resulting in the development of ookinetes. By contrast, development of zygotes from pbdozi females fertilized by wild-type males was incomplete and similar to development of zygotes from the pbdozi line. These crosses demonstrate that the block in zygote/ookinete development is essentially due to a lack of DOZI of female gametocyte origin.

Other mutants
RMgm-100: P. berghei ANKA cl15cy1 mutant lacking expression of DOZI (protein development of zygote inhibited; ATP-dependent RNA helicase, putative)
RMgm-133: P. berghei ANKA cl15cy1mutant that expresses a c-terminally GFP-tagged version of DOZI


  Disrupted: Mutant parasite with a disrupted gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_1217700
Gene Model P. falciparum ortholog PF3D7_0320800
Gene productATP-dependent RNA helicase DDX6
Gene product: Alternative nameDOZI, protein development of zygote inhibited
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/construct usedPlasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
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Plasmid/construct sequence
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GTACCGAGCTCGGATCCACTAGTAACGGCCGCCAGTGTGCTGGAATTCGGCTTAAAAAGA
ATTCAATATACAGAAAATATATCCTGTTTAGGCTTTATATTGTTATTTAGTCTCTGATAT
CTTTATTTATTATATATATTTTTATTTATTCTATTTTGTTCCTTTTTTTTTATTTGTATG
TAGTTTATTATTATACTATTATTATTTTTTTTTTTGCTTTCATTCTTTAATTCATATCGA
GTTATTTTTCTTTCTTATAACATTTATATTCCTTTCCATATTCTATTCATATATTTCTTT
TATTACGCTGTTAATTTTATAATATTCTTTTTTACGGCATAATTCTTTCATCTCAATACG
TTGCATATATATAATCCATATATGTATATAACATATCCTCTCCATGTTTTTCATATTTTT
TTCTACTATTCCCTTTTTCAACAAATGATATAAACAGCTATTCTCTCTCTCTCTATATAT
ATATATATTACTATTCACGCGTTTCATTTTAAAATTCTTATATAAATATAAAATTAAACT
GTAATATATATAACACTTGTAAGCTTGCATGCCTGCAGGTCAACAATAAATAATAAATAA
ATATTGTGGAAATAAAATAACATATAATTATTTTTAATACATTGATTTCCCTTTTATTTT
TTTAAATTTCATTGATATAAAAATATATAATAATAACATATATGATTTCAAATTAATCTT
TTCAAAAATGGTGTTTATTTTTGTATGTTTGTGTATGAATTAATCACATAACACATCTAT
TAAATTGAGTTGGTAATATAGACACAAATAAATATATATATTTTTATAGCTTAAAAGTGT
GTTATGAATATTTTAAGCATATTTTCTTTTTCTTTGGATTGTGTAAAATGAACTCATATA
ATGCGTTTTTTTGTTTTTGTTATTTTGTCATTTTGTTATTTTGCTATTTTATGGATTAAT
TTTTGTTTATAAAATGGGAAATAATTTTAACATATTTAAATAAATGGAGAAAAAATATAA
AATAATTATAAAAAAAAGTTAATACACATTTTTTCCTGTTATAGACCTTATATTTATTTA
TCCATATATATATATATATATATATATATATATATATACATACCAAGTGAATTAAGAGGA
AAGCTAATTTATTATTCAGAATAATATATGAACTATATATAATTTTTATTATTTTGGTGT
ATATTAATCTGTCTATATGCATACATGCAATAATTTATCGACTTATATATCAAATAACAT
AAAATAGAAGTGTTTTAAATTATGGATATATGCTCAATATTCATTTTTTTTAATAAGTTA
GCTATATTTAAATTATACATTTTATATATGGTCTCTTTTTTTTTTAAATATTATTTAAGT
GATCATGAAAATATAAATAATTTTTTTTTATTTAATATCCTTTTGCTTGCATGTGGTAAA
TGGAAATTTGGATGTGTTTTGAARGTTCGGATATAGTTGTATGGACATATAATATATTTT
GTGAAAAATTGGTTTTATGTTTATACTTATGCCAATACTTTTTGAGTAAAACAAAGCAAG
TGCTTATAAATAATTAAAGCCAATTTTATAATATATATTTTTTTATTTAATTTGAATTTA
GTAGTATAATTTTTTATGGTAAGTGCTCAAAGAGAGTTGCTTATAAAGTATGGTTTGTTT
CTTTTTCGCCATTTTGAATTACACATTAAAAATATATAGATACATATATTATAATATGAA
ATCATTAATAATTTAGGGAAATTCTACAAATTTAAAAACGAATAAAATAATTGTTTTTCA
TCATGCCATAACACAATATTGATATATACATGTACAAACATTTTTTTTATTTGGAAAATA
TAAATTATATAAAAAAAAATGTATAGTATACAAAATGAGCATATTCACACGGGGTGGACG
TTCATTTTTTCATTTTTCCCCTGTTTTTTATGAGTATATGATAAAATTTTATGAACATTT
ACACAAAATGAAAATGGATATATAGGAAAAATGGAGCGGTATTTCATTTATCTTTGATTG
TCATTTGGATATTATATTACCYTGGGTAGGCAATTAAAAATGTTAAATAACAATTTAAGG
AAATTATATTTTATATATTAAAATTAACACTGTATTATATGATTCGCTTATAAAAGCCAC
TCTTTCCCCATGCAAAGCTGTTTAATATCAATTTTAACAAATTACACACATGTTAATATA
TTTATATATATAATTTATATATTTATAATTTATATATTTATATTTTTATTATTTATATAT
TTATTATTTATTGTGTGTGTCAATTCGGGTAGGATATACCTCTTTTTTATTGTTTAAAGC
GATTTGTATTCTAAAATATAAAGRATTTGAAAAAGAGAAAGATAGAATATGATCCCATCA
TATATAGCCCTATAATTTTTATTTAGCAGCGAATTAATTTTTCTATTAAGTTTATGTGTA
ATTAAAATAACGGAATATATATAATACAATAAAAAAGTGCATAAATTAAAATTTTTTCAA
TTAAATTTTTTTTTTTAAGGGGTTATATAATATTAAATATATAAAATACGATTATATATT
TTTGCTACAATTTTTTATATTAAGATATAAATAGTAAATAAATGGTATTATATGGCATGT
AATATATAAATTTTTTCCAATTTTTATTTTATATACACTTTTCCTTTTTTTGTCATAAAA
CTTAAACAATTTACACATTCATTTTAAAAATTGACTATTTGTTTCAACATTTTTTGAGTT
TCCGTTTTATAATAGTATTTTCATTTGTATATTGCTTATATATATAAATACACACCTAAA
TGTTACAAAGGATCAATGCATAAACCGGTGTGTCTGGTCGTCGCGATGACCCCCAAGAGG
GGCATCGGCATCAACAACGGCCTCCCGTGGCCCCACTTGACCACAGATTTCAAACACTTT
TCTCGTGTGACAAAAACGACGCCCGAAGAAGCCAGTCGCCTGAACGGGTGGCTTCCCAGG
AAATTTGCAAAGACGGGCGACTCTGGACTTCCCTCTCCATCAGTCGGCAAGAGATTCAAC
GCCGTTGTCATGGGACGGAAAACCTGGGAAAGCATGCCTCGAAAGTTTAGACCCCTCGTG
GACAGATTGAACATCGTCGTTTCCTCTTCCCTCAAAGAAGAAGACATTGCGGCGGAGAAG
CCTCAAGCTGAAGGCCAGCAGCGCGTCCGAGTCTGTGCTTCACTCCCAGCAGCTCTCAGC
CTTCTGGAGGAAGAGTACAAGGATTCTGTCGACCAGATTTTTGTCGTGGGAGGAGCGGGA
CTGTACGAGGCAGCGCTGTCTCTGGGCGTTGCCTCTCACCTGTACATCACGCGTGTAGCC
CGCGAGTTTCCGTGCGACGTTTTCTTCCCTGCGTTCCCCGGAGATGACATTCTTTCAAAC
AAATCAACTGCTGCGCAGGCTGCAGCTCCTGCCGAGTCTGTGTTCGTTCCCTTTTGTCCG
GAGCTCGGAAGAGAGAAGGACAATGAAGCGACGTATCGACCCATCTTCATTTCCAAGACC
TTCTCAGACAACGGGGTTCCCTACGACTTTGTGGTTCTCGAGAAGAGAAGGAAGACTGAC
GACGCAGCCACTGCGGAACCGAGCAACGCAATGAGCTCCTTGACGTCCACGAGGGAGACA
ACTCCCGTGCACGGGTTGCAGGCTCCTTCTTCGGCCGCAGCCATTGCCCCGGTGTTGGCG
TGGATGGACGAAGAAGACCGGAAAAAACGCGAGCAAAAGGAACTGATTCGGGCCGTTCCG
CATGTTCACTTTAGAGGCCATGAAGAGTTCCAGTACCTTGATCTCATTGCCGACATTATT
AACAATGGAAGGACAATGGATGACCGAACGGGCGTTGGTGTCATCTCCAAATTCGGCTGC
ACTATGCGCTACTCGCTGGATCAGGCCTTTCCACTTCTCACCACAAAGCGTGTGTTCTGG
AAAGGGGTCCTCGAAGAGTTGCTGTGGTTCATTCGCGGCGACACGAACGCAAACCATCTT
TCTGAGAAGGGCGTGAAGATCTGGGACAAGAATGTGACACGCGAGTTCCTCGATTCGCGC
AATCTCCCCCACCGAGAGGTCGGAGACATCGGCCCGGGCTACGGCTTCCAGTGGAGACAC
TTCGGCGCGGCATACAAAGACATGCACACAGACTACACAGGGCAGGGCGTCGACCAGCTG
AAGAATGTGATCCAGATGCTGAGAACGAATCCAACAGATCGTCGCATGCTCATGACTGCC
TGGAATCCTGCAGCGCTGGACGAAATGGCGCTGCCGCCTTGTCACTTGTTGTGCCAGTTC
TACGTGAACGACCAGAAGGAGCTGTCGTGCATCATGTATCAGCGGTCGTGCGATGTCGGC
CTCGGCGTCCCCTTCAACATCGCTTCCTATTCGCTTTTGACGCTCATGGTTGCACACGTC
TGCAACCTAAAACCTAAGGAGTTCATTCACTTCATGGGGAACACGCATGTCTACACGAAC
CATGTCGAGGCTTTAAAAGAGCAGCTGCGGAGAGAACCGAGACCGTTCCCCATTGTGAAC
ATCCTCAACAAGGAACGCATCAAGGAAATCGACGATTTCACCGCCGAGGATTTTGAGGTC
GTGGGCTACGTCCCGCACGGACGAATCCAGATGGAGATGGCTGTCTAGCGGAAATACAGA
AGCTAGCTTTGATCCCGTTTTTCTTACTTATATATTTATACCAATTGATTGTATTTATAA
CTGTAAAAATGTGTATGTTGTGTGCATATTTTTTTTTGTGCATGCACATGCATGTAAATA
GCTAAAATTATGAACATTTTATTTTTTGTTCAGAAAAAAAAAACTTTACACACATAAAAT
GGCTAGTATGAATAGCCATATTTTATATAAATTAAATCCTATGAATTTATGACCATATTA
AAAATTTAGATATTTATGGAACATAATATGTTTGAAACAATAAGACAAAATTATTATTAT
TATTATTATTTTTACTGTTATAATTATGTTGTCTCTTCAATGATTCATAAATAGTTGGAC
TTGATTTTTAAAATGTTTATAATATGATTAGCATAGTTAAATAAAAAAAGTTGAAAAATT
AAAAAAAAACATATAAACACAAATGATGTTTTTTCCTTCAATTTCGATGGGACCACATCA
TAATGATGAACACATATATATACATATACACATACACATTGCGGCTTCAATGCAAAATCT
ATTTGTGCACAGTATTACTAACTTACCCCACATATACAATACTTTTTTTATTTATCATCA
ATTTTTTTCTTTTTTCCCATTATACTTAATTTTTTTAAGCTATTGACATTATATTGGAGT
ATAAATTAATTAAAGCATAATATATTAATACACAAAACATATATACATACATATATATGC
ATATTTGTACATTTTTTTTTGTTAAATTACTATATATAATTTCACCCAATTAAACATGCG
AACACAAATATAATTGATTAACTAGGAATTCTGTTTATATATATTTATACACAATATACC
TATAGATATATAGTGCAACCTATATATCCAGAATGACTCTAAATTCGACGTTATGGAACT
CTTTAGTTTTTTCAAGGAATTTATTAATTAAAAAATTAATGAAAATAAAACGTACAAATA
GGAGAATACATTTTTTTTTGTTCTTTTTTGCTCGTAGTCACACACAAAAAATGTAATAAA
AATGCAATTTTTCGTGTTTATTGGCTTTCACCATTTTTATAATTTTATAATTTATAATGC
ATTGTTATGATATAAAATTTATTAATCATTATTCTTCTGCATTTCACGATTTTTCAAATA
TCGATTTCTTAATATCACAAATAAAAATCAAATTATGTAAAAGGTGTGATATCCACACTT
TTCAACCTATACAAAATGTAATAACATATATTTATATTTACATTAATATTTTTAACTCTT
TTGTGAAAAAATTTAAAAGAAAAAAAAAAATTTATAGCGATTTACATGTTTTTAAAATGG
TTAAAAAGGTAAAAAAATTAATTGTTTCTTATTGATACTACATTTGCATGCTTATATATC
AAACAATGTATTGGATCACGTTTTGTTCGCATTAGGATCCACTAGTTCTAGAGCGGCCGC
CACCGCGGTGGAGCTCCAATTCGCCCTATAGTGAGTCGTATTACGCGCGCTCACTGGCCG
TCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAG
CACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCC
AACAGTTGCGCAGCCTGAATGGCGAATGGGACGCGCCCTGTAGCGGCGCATTAAGCGCGG
CGGGTGTGGTGGTTACGCGCAGCGTGACCGCTACACTTGCCAGCGCCCTAGCGCCCGCTC
CTTTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAA
ATCGGGGGCTCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACCTCGACCCCAAAAAAC
TTGATTAGGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGACGGTTTTTCGCCCTT
TGACGTTGGAGTCCACGTTCTTTAATAGTGGACTCTTGTTCCAAACTGGAACAACACTCA
ACCCTATCTCGGTCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCCTATTGGT
TAAAAAATGAGCTGATTTAACAAAAATTTAACGCGAATTTTAACAAAATATTAACGCTTA
CAATTTAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTA
AATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATA
TTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGC
GGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGA
AGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCT
TGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATG
TGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTA
TTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCAT
GACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTT
ACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGA
TCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGA
GCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGA
ACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGC
AGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGC
CGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCG
TATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGAT
CGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAACTGTCAGACCAAGTTTACTCATA
TATACTTTAGATTGATTTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCT
TTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGA
CCCCGTAGAAAAGATCAAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTG
CTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACC
AACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCT
AGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGC
TCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTT
GGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTG
CACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCT
ATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAG
GGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAG
TCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGG
GCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTG
GCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTAC
CGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGT
GAGCGAGGAAGCGGAAGAGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGAT
TCATTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGC
AATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGC
TCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCA
TGATTACGCCAAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTG
Restriction sites to linearize plasmid
Partial or complete disruption of the geneComplete
Additional remarks partial/complete disruption
Selectable marker used to select the mutant parasitetgdhfr
Promoter of the selectable markerpbdhfr
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modification
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1AAAGAATTCAATATACAGAAAATATATCCTG
Additional information primer 12238EcoRI; 5'-region
Sequence Primer 2AAAAAGCTTACAAGTGTTATATATATTACAG
Additional information primer 22239HindIII; 5'-region
Sequence Primer 3AAACCCGGGACCACATCATAATGATGAACAC
Additional information primer 32240SmaI; 3'-region
Sequence Primer 4AAAGGATCCTAATGCGAACAAAACGTGATCC
Additional information primer 42241BamHI; 3'-region
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6

  Transgene: Mutant parasite expressing a transgene
Type and details of transgene
Is the transgene Plasmodium derived Transgene: not Plasmodium
Transgene nameRFP
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/constructPlasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
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Plasmid/construct sequence
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AATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTT
AATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACC
GATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTT
CTCCTTACGCATCTGTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTGC
TCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGA
CGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAGCTGC
ATGTGTCAGAGGTTTTCACCGTCATCACCGAAACGCGCGAGACGAAAGGGCCTCGTGATA
CGCCTATTTTTATAGGTTAATGTCATGATAATAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAACTGTCAGACCAAGTTTACTCATATATACTTTAGATTGAT
TTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATG
ACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATC
AAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAA
CCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAG
GTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTA
GGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTA
CCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAG
TTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTG
GAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCATTGAGAAAGCGCCACG
CTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAG
CGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGC
CACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAA
AACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATG
TTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCT
GATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAA
GAGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGG
CACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAG
CTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGA
ATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGATTACGCCAAGCTT
CCGCGGGTATATGGTAAAGAACCTACTAACACAATAAAATATTTAAATAATGTATTTCCT
ATAAATAAATTTACAGATTTATTTTTTAATACAAAAGATATAGATATACCAGAAATAAAT
GATCAGTTTAAAGGTTTTAAATTCTTTATGACATCATTTATAAATCATGGATCATATCCA
CTAACAATAGAATGTGGTGTAACAAATGGTGGAACTAGTTATAAAAGAGCAATTATTTTA
TTGCATGTTCGAACTGATTTAAAAGATAGACCAGTTTCATTTTGTGATTTTCGAAAAGGA
GAATTATATAATTATTTGAATGCTTATACTGAAGGGGATGTATGCATAATAATTTCCAAA
TCAAATACAAGTTTTGGTTTTAGATGCCCAGTAAATACAAAAAAAATGCCAAAAAATTGT
TTTACGCAAGTATATGAAAAAGGGTATCTAAATGACGCCAATAAAATTAATACTAAAAAT
GTTATTAACTATTCATTTGAAAATCCAGAATATGCGCTAGCTGGTTYTAATTATACATTA
ACAAAATCGTATCAATTTGAATGTCATTGTGTAGATAAAGAAACAGAACAAATTGTAAAA
ACGGTTTTAGTCAAATATGTAAATGAAGATGAAATATATGATTATAATGATTTTCCAATG
GTGAATCACAAACCTATTATTGCACATCCAAATAAAACACATCAAGCTTGCATGCCTGCA
GGAATTCGATGGCCGCTCTAGCTTTGATCCCGTTTTTCTTACTTATATATTTATACCAAT
TGATTGTATTTATAACTGTAAAAATGTGTATGTTGTGTGCATATTTTTTTTTGTGCATGC
ACATGCATGTAAATAGCTAAAATTATGAACATTTTATTTTTTGTTCAGAAAAAAAAAACT
TTACACACATAAAATGGCTAGTATGAATAGCCATATTTTATATAAATTAAATCCTATGAA
TTTATGACCATATTAAAAATTTAGATATTTATGGAACATAATATGTTTGAAACAATAAGA
CAAAATTATTATTATTATTATTATTTTTACTGTTATAATTATGTTGTCTCTTCAATGATT
CATAAATAGTTGGACTTGATTTTTAAAATGTTTATAATATGATTAGCATAGTTAAATAAA
AAAAGTTGAAAAATTAAAAAAAAACATATAAACACAAATGATGTTTTTTCCTTCAATTTC
GATTGATAATTATGCAGCCCAGCTTAATTCTTTTCGAGCTCTTTATGCTTAAGTTTACAA
TTTAATATTCATACTTTAAGTATTTTTTGTAGTATCCTAGATATTGTGCTTTAAATGCTC
ACCCCTCAAAGCACCAGTAATATTTTCATCCACTGAAATACCATTAAATTTTCAAAAAAA
TACTATGCATATAATGTTATACATATAAACATAAAACGCCATGTAAATCAAAAAATATAT
AAAAATATGTATAAAAATAAATATGCACTAAATATAAGCTAATTATGCATAAAAATTAAA
GTGCCCTTTATTAACTAGAACTAGTCGTAATTATTTATATTTCTATGTTATAAAAAAATC
CTCATATAATAATATAATTAATATATGTAATGTTTTTTTTATTTTATAATTTTAATATAA
AATAATATGTAAATTAATTCAAAAAATAAATATAATTGTTGTGAAACAAAAAACGTAATT
TTTTCATTTGCCTTCAAAATTTAAATTTATTTTAATATTTCCTAAAATATATATACTTTG
TGTATAAATATATAAAAATATATATTTGCTTATAAATAAATAAAAAATTTTATAAAACAT
AGGGGGATCCATGGTTGGTTCGCTAAACTGCATCGTCGCTGTGTCCCAGAACATGGGCAT
CGGCAAGAACGGGGACCTGCCCTGGCCACCGCTCAGGAACGAATTTAGATATTTCCAGAG
AATGACCACAACCTCTTCAGTAGAAGGTAAACAGAATCTGGTGATTATGGGTAAGAAGAC
CTGGTTCTCCATTCCTGAGAAGAATCGACCTTTAAAGGGTAGAATTAATTTAGTTCTCAG
CAGAGAACTCAAGGAACCTCCACAAGGAGCTCATTTTCTTTCCAGAAGTCTAGATGATGC
CTTAAAACTTACTGAACAACCAGAATTAGCAAATAAAGTAGACATGGTCTGGATAGTTGG
TGGCAGTTCTGTTTATAAGGAAGCCATGAATCACCCAGGCCATCTTAAACTATTTGTGAC
AAGGATCATGCAAGACTTTGAAAGTGACACGTTTTTTCCAGAAATTGATTTGGAGAAATA
TAAACTTCTGCCAGAATACCCAGGTGTTCTCTCTGATGTCCAGGAGGAGAAAGGCATTAA
GTACAAATTTGAAGTATATGAGAAGAATGATGCTAGCGGAGGAGGTGGATCTGGTGGAGG
TGGAAGTGCTAGCGTGACAGGGGGAATGGCAAGCAAGTGGGATCAGAAGGGTATGGACAT
TGCCTATGAGGAGGCGGCCTTAGGTTACAAAGAGGGTGGTGTTCCTATTGGCGGATGTCT
TATCAATAACAAAGACGGAAGTGTTCTCGGTCGTGGTCACAACATGAGATTTCAAAAGGG
ATCCGCCACACTACATGGTGAGATCTCCACTTTGGAAAACTGTGGGAGATTAGAGGGCAA
AGTGTACAAAGATACCACTTTGTATACGACGCTGTCTCCATGCGACATGTGTACAGGTGC
CATCATCATGTATGGTATTCCACGCTGTGTTGTCGGTGAGAACGTTAATTTCAAAAGTAA
GGGCGAGAAATATTTACAAACTAGAGGTCACGAGGTTGTTGTTGTTGACGATGAGAGGTG
TAAAAAGATCATGAAACAATTTATCGATGAAAGACCTCAGGATTGGTTTGAAGATATTGG
TGAGGCTTCGGAACCATTTAAGAACGTCTACTTGCTACCTCAAACAAACCAATTGCTGGG
TTTGTACACCATCATCAGAAATAAGAATACAACTAGACCTGATTTCATTTTCTACTCCGA
TAGAATCATCAGATTGTTGGTTGAAGAAGGTTTGAACCATCTACCTGTGCAAAAGCAAAT
TGTGGAAACTGACACCAACGAAAACTTCGAAGGTGTCTCATTCATGGGTAAAATCTGTGG
TGTTTCCATTGTCAGAGCTGGTGAATCGATGGAGCAAGGATTAAGAGACTGTTGTAGGTC
TGTGCGTATCGGTAAAATTTTAATTCAAAGGGACGAGGAGACTGCTTTACCAAAGTTATT
CTACGAAAAATTACCAGAGGATATATCTGAAAGGTATGTCTTCCTATTAGACCCAATGCT
GGCCACCGGTGGTAGTGCTATCATGGCTACAGAAGTCTTGATTAAGAGAGGTGTTAAGCC
AGAGAGAATTTACTTCTTAAACCTAATCTGTAGTAAGGAAGGGATTGAAAAATACCATGC
CGCCTTCCCAGAGGTCAGAATTGTTACTGGTGCCCTCGACAGAGGTCTAGATGAAAACAA
GTATCTAGTTCCAGGGTTGGGTGACTTTGGTGACAGATACTACTGTGTTTAACTCGATCC
CGTTTTTCTTACTTATATATTTATACCAATTGATTGTATTTATAACTGTAAAAATGTGTA
TGTTGTGTGCATATTTTTTTTTGTGCATGCACATGCATGTAAATAGCTAAAATTATGAAC
ATTTTATTTTTTGTTCAGAAAAAAAAAACTTTACACACATAAAATGGCTAGTATGAATAG
CCATATTTTATATAAATTAAATCCTATGAATTTATGACCATATTAAAAATTTAGATATTT
ATGGAACATAATATGTTTGAAACAATAAGACAAAATTATTATTATTATTATTATTTTTAC
TGTTATAATTATGTTGTCTCTTCAATGATTCATAAATAGTTGGACTTGATTTTTAAAATG
TTTATAATATGATTAGCATAGTTAAATAAAAAAAGTTGAAAAATTAAAAAAAAACATATA
AACACAAATGATGTTTTTTCCTTCAATTTCGGGTACCGACCATATAAGAATTAACCCTTT
ACTTTTTTCGTATTTTTCATTAACTTCCATTTGTTAATTTTTTAAAATAAGTTTTTATTT
TCAATAAAAAAACTATATTAATTTAATCTAATTATAAGCAAAAAATTAAATTCAAAGAAT
AAAATTATATGCACATAATGTGTGCCCCTTTAAAACAAATATTCGATGTTTAATTCGTAC
TTTATGCTAATTTTTTATTATTCACAGATTTTATATTAGAGTTATAAAAATTTAGAATTT
TTTCAAGTAAAATATTATTAGTTAATGGCATTAAAATGTATAAGGAAAAGTTAATATAAA
AATTAAAAAAAACAGTTACACGTATATTACGCATACAACGATGTATATATATTCATATAT
ATTAATAATTCTAGAGTCGCGGCCGCTTTACTTGTACAGCTCGTCCATGCCGAGAGTGAT
CCCGGCGGCGGTCACGAACTCCAGCAGGACCATGTGATCGCGCTTCTCGTTGGGGTCTTT
GCTCAGGGCGGACTGGGTGCTCAGGTAGTGGTTGTCGGGCAGCAGCACGGGGCCGTCGCC
GATGGGGGTGTTCTGCTGGTAGTGGTCGGCGAGCTGCACGCTGCCGTCCTCGATGTTGTG
GCGGATCTTGAAGTTCACCTTGATGCCGTTCTTCTGCTTGTCGGCCATGATATAGACGTT
GTGGCTGTTGTAGTTGTACTCCAGCTTGTGCCCCAGGATGTTGCCGTCCTCCTTGAAGTC
GATGCCCTTCAGCTCGATGCGGTTCACCAGGGTGTCGCCCTCGAACTTCACCTCGGCGCG
GGTCTTGTAGTTGCCGTCGTCCTTGAAGAAGATGGTGCGCTCCTGGACGTAGCCTTCGGG
CATGGCGGACTTGAAGAAGTCGTGCTGCTTCATGTGGTCGGGGTAGCGGCTGAAGCACTG
CACGCCGTAGGTCAGGGTGGTCACGAGGGTGGGCCAGGGCACGGGCAGCTTGCCGGTGGT
GCAGATGAACTTCAGGGTCAGCTTGCCGTAGGTGGCATCGCCCTCGCCCTCGCCGGACAC
GCTGAACTTGTGGCCGTTTACGTCGCCGTCCAGCTCGACCAGGATGGGCACCACCCCGGT
GAACAGCTCCTCGCCCTTGCTCACCATGGTGGCGACCGGTGGATCCTTTTTATCATTTGG
ATAATTAATTCTTATATTTATTCTGAATTAAATCAAACTTCCTATTCATATGTACATGCA
TCTATATGTATGAAATACATATAATACTACTATATACCACCAAATTACATATCCAAATAA
CTTGTGCCCTTAACACTGCATATATATGTTTGTCCATATATTTGCAAATATCTATATATA
CTATAAACCTTATGCACAAACCCCTTTTTCGCATATAAAAATGAATATATATATATATAT
ATATATATACTGTCATATGAAAATATATATCCATTTATTTATATTTATATTTATATTATC
TTGCATAAACATTTTATAATATATTTTCTTTAATATAACTTTCCCATATACGTACACACA
TATATAAATATATAGTATGTGTACATATCTACTTATTTTATTGCATATTATATCCCCTTT
TTTTCTCCAATTTTTTTTTTTTATACATGTAAAAGTCGAAAATTCCCATTTATAATAAAC
TTAGGAGAAAATATATATTATTAACTAGTAGTGGTGAATAAGCTCTTTGAAGTCTCAAAA
CAATAAAATTTAAATGTGCATAAATAAGATTGTGAATACGCAAAAATGCAAATAAATACG
CATATTATCATTCATTTCTTAATTATTTAGAAACGGTTCGAACTGCTTCTAATCGTGTCT
TAAGACAAACCCACATCTTATCTCAAAGTTTAGCATTTCGAAGCTTATTATTGTTTCTAA
AACATCTCAACATTTTACTTACAAACTTTGAATGAAAAAAAACAATTTTATAATTATATA
CTAACCATAAAAAAATAAATACCCAAAACGAATAAAATATATTATGTACCTATTTTAAAT
GCGTTTATACCCAAATTTTCGAACCACAATTTTTATATGAACATGTTAATTTTATTTCAC
GTCCCCATTTTATATATATAAAATTTTTTTCCTATTTCTTATTACCTTTAATATTATTTA
TACTAGATACAGAAATAATTTAAAAGGTACTATTTAAAAATGTGTTACCATTTTATTTAA
CTCACAAGCCCCTTTATTATATTAAATTTAAAAGCTTATTTTATGAGGGTTTATATAAAA
ATTCATTCGGTTTTAAATGTAAATATATATATGCACATAATTTTGTATAAATAAAACATA
TATATACATTATAATTATTTATTTGACAGTTTTGAAGGATTTATGAAAAGGAAAAATTTA
TCATGTGTATATATGTTTTTATATTTTATTGACAAGAAATTATAAAGCTCGGAAAATTAA
TAGAAAAGTAGGTGCAAGCATGCACATATAAATACATTAAACACCAAAATACTTTTCCAA
TGACTTGCCTACATGTCTTTGTACATATAATACATACATAGTATAATAAAATATGAAGCT
TTTAAATTATAATAAATTTTTATCTTCATCGGTATAAGGTTCAGATGCAGGGGCGTTATC
TTCCTCATTAGTATAAGAACCTTTTGTTTCATCATCATCATTATTATCTTCGGTACTTAA
TCTGTTTAAATATGATATCTTTATAAATGAAGCAATACCACATTTTTACACAAATATATT
ACATTTTTTATGTATTGCATATGTGAAATGTATGAGTGATATAATATGGTAGACATGAAT
AGGCTAAAACATAGATAAAACCGAACTAAACAAATAAATATAGGAAAATACCCCAATACG
AATATTTGTAACATTAAAAATTAAAAAGACACACTTTAATTAAATAAAATAGAGACGTGA
ATAAAAATGTATTTATAATAAAAGTACGTAAAAAGAAAGCGTTACCAAAACATAAATGAT
TTTTTTCTAACTAAATAAAATTGCATATGTGAAGGTATAATATTTTCCTACATAAAATGG
CGTTTATTGGTTTTTTAATATGTTTTACTTCATTTTGATTTATTACACATATATAAATTT
TTTACAAAATTACGCCATTAATATAGACATTTTTAAGAATGTTGTATTTATTGATCATAT
TCGAACTAAATTCCGTTGTAAATTCACTCAGGTGCATGCAAAAGATGCGGTATTTTTTTG
TACTATTAAAAATTTATATATACAATAATTGTTCAAAATACATAATTTTTTTTAAGCATT
TTACAAACACAAATAATTTTTTCAAAATAAAATAAATTGTTACGTATCTCGAAAATAGTG
TATTTAATATTATACAAATGTAAGGGCAATACATATATATATATTTATTTATTTAAAAGA
CAATTTATAAATGCATATTATTCATAAATTTTTATAATATTTCTCGATAATTTTGTTCGC
AATTTGATGGTGACCCCTTATACATTTGAATTTGCTTTAAAAATATTAAAAAGGAAAATT
TTTTTTTGTTATATAGAGTCATCATGCTTGATTATTTTATTTCTGAATTTAATTTATCCT
CATGTATTTATTATAACAATACGACGTGAAGTTAAAACACCAGTTGCATTGATCAATTTA
AAATTTTGATAAAAAGTATTTAAAAATAAAAGGTTTATAAATAGGGGCTTATTCATTTAT
ATTTCTTTTTATTATATTTTCTTTATATTTTTCAACAAATATTTATAATTCGTAATTTTT
TCGTCAATTTAATATATTTGCCTTTAAGTTTTTCGTAAATTACACTTCAGTAATAATAAT
AAAGCTACATTTTATAGTGCGCATTGTTAAGCATATAATCGATAGGACTTTTAATATATA
TTTTGTTTTTACACAAAATAAGAAGAAGGTCCCTACATTTTTTTCGTTAAAAAGGAAATC
TCAATAATATTAAATTGTGTGTAATTTTTTTTGATGTATACAAATATGACGTGTATATAC
GCAAAGGTGCTTGTAAAACAAATGGTATTAAGCTGTGTGGTCACATTTGTAGTTACATAG
CAATTATATATATATCATTTCTAATTTTAATTCAATTTAATTTCGGTATTAACTATGCAT
ATAAACATATTGTTATTATTATCTTGCCTATCATAATAAATTTTGTGTCTATATAGAAAT
GTATTATCTATTTTTTAGCGAAGTAGCATAAGTATTATTTATATTCAAAGAAATAAATAA
AGGTATTAAAATTAATACGAAAATAAAAATTAAAGGATGATGGCGATTATTAGTTCTTTT
TAATTCCATCATCTATCCTTATATGTAGTATATTGGGGTTAGAGATAGTGGGTTATGAAT
ACCAAAAATATAGAAAATTGCAAAGGAGTTGATTTATTCTCTGTTGTATAAGAATGTACA
CAGTTAAAGTTAGTATATATGTGTATATTTTTCAGTCTATATAAATATACTTTTGTTTTC
TCATTGGTATGTTCAATTTTTTATATTATTTTACGTGTCGATGGATACAATTTAGTATTT
TTTTTAATTTTGTATTTTTGAATTATATTAATCTAGATTATTCATATATTTTTTCATATG
CAGATAGAAAAAGGTTTCATACGTTAGTTTATCCTACAAATTGAATATTAACACATACAT
ATATTTATATTTTTTATTAATAGAAGGATCCAAAATGAGTAGATCTTCTAAGAACGTCAT
CAAGGAATTCATGAGATTCAAGGTTAAAATGGAAGGTACTGTTAACGGCCACGAATTCGA
AATCGAAGGTGAAGGTGAGGGTAGACCATATGAAGGTCACAACACAGTCAAGTTGAAGGT
TACTAAGGGTGGTCCACTGCCATTCGCTTGGGACATCTTGTCTCCACAATTCCAATACGG
TTCTAAGGTCTACGTCAAGCACCCAGCTGACATTCCAGACTACAAGAAGTTGTCCTTCCC
AGAAGGTTTCAAGTGGGAAAGGATCATGAACTTCGAAGACGGTGGCGTTGTTACTGTTAC
TCAAGACTCCTCCTTGCAAGACGGTTGTTTCATCTACAAGGTCAAGCTCATTGGTGTCAA
CTTCCCATCTGACGGTCCAGTCATGCAAAAGAAGACTATGGGTTGGGAAGCTTCTACCGA
ACGTTTGTACCCAAGAGACGGTGTCTTGAAGGGTGAAATCCACAAGGCCTTGAAGTTGAA
GGACGGTGGTCACTACTTGGTCGAATTCAAGTCTATCTACAAGGCCAAGAAGCAAGTCCA
ATTGCCAGGCTATTACTACGTTGACTCTAAGTTGGACATCATCTCTCACAACGAAGACTA
CACTATCGTCGAACAATACGAACGTACTGAAGGTAGACACCACTTGTTCTTGTAAACTAG
TTCTAGAAGTAGTGTGTAGCGTATTCTTTTATTTTACAGAAAATGTATATTATCATTTTT
CGCATTTCATCGTTTAAACAAGTACATGAACGTGTGCATGCAATTATTTCTGTGTTTGGA
TTTGTATTCAAATCATCATGAACTTTTTTTGAATATTCGTTACAAGCCATAATAGAATAT
ACACCATCTACAATATAATTTTTTTTTCACTATTTTATATTTCATCCTATTGTGTATGTA
TATTCCTTTAATAAAAAATCCATATGCTTAACATTCACATATATTAATAATTTTAATTAA
TTTTTTTTTTTGCACAGATAAAACTTTTCTTTTTAAAAAAAAGGTATATACACTCTTTTT
TACCCCACATTTAACTGATTTTCACTCACCATTACATATAGCTATATATTGCATATTACT
ATTATGTAAGGCAAATGTTTATTATTATTGCTGTTATTTTTTATTTATATATTTTTTTCC
ATATATCAATTTAAGGAGAAATAAAATAATTTGCTATTTGAAAAAATATAAAACAAATAT
CTAGTCGTGCAATACTGAATTCGAATACTTAAAACAAAAAATAAATTAATTAAATACCCT
TTTAATATTGTAGTTAAAATCGATGTGTTTAGAGAATATTTTTTATTGCTATTTATCTTC
TTTTTTTTATTTTTCTTCCATGTTTTCTCATTCAGCTTTCTATGTATTTTAGTAATATTC
TCCACACACAAACTATAAATTTTCTTATGAAAAATCACAAAATTTAGCAAATAGCGCTTA
GGCATGTACTCGTAAATAAGCATGTGCATAGTATAATACACTTCTCATCAATTTTGAGAG
GATTTTATTTAATTTCGGCACGCCCCTCTCAACTTGTGTTTATCACATATTCAATACTCC
ATAAAAAATGATAGCATCATTTCGATATGCGGGTACCGAGCTCGAATTCTCTTGAGCCCG
TTAATGAAATAGATACAATTCATTCATGTTATATACATCTAGAACATAATCTGAATATGG
TTCAAGTTAAATGTCCAAAAATTATAAAAAGTGATGATATTTTTGATGGTAATACCATAA
TAGACACCAAGGTAACATCACGAAGTAGTCAACAAAATAATTTTTATTTAGAAAATACAG
ATGTTGAACCAGAAGAAATAGAGAAATATAAAAATATAGAATACATACCAGAAAACGATG
AAGTAATGCATCTAGACAAAAAAGAAAAGCTAGATGATATATTACCAGGTGTTATCATAT
TAGATAAAAATAAAATGTTCAAAGAAAAAGGACATTTCACTTTTGTTACTCCATTAATTG
TAGAAAAGGTATTAATATTAAAAATATATTGTGATAATACTAAAACAATAATTAATAATA
TGAAAGGGAAAAAAGGTATTACAGTAATAAGGATTTCTCAAAATACAACAAAAAATAAAT
TTTATGGATGTGACTTTTCAGGTAATTCTAAAAAAACATTTTACTATTCCAATGTTTATG
ATTTAGAAAAAAAAAATGAGTTTTGTGAAATAGAATTAAAAGAAAATATAGTAGTTAGCT
TAAATTGTCCAACTGGTAAAATTAATCCAAAAAATTGTTTTAGAAATGTATATATAAAAA
GTAATATGAATGAACAAACAACCGAAAATATAGAAAATATATTTAACGAAATAAAAGTTA
TAGATGCAGATTATTTTATAAATAATTCATCAACCTTTTTGATGATTTCCAAAATTACAA
AAAAAGAGTTTGATTTTTATTGTACATGTGAAGATTATAAAACCAAAAATATAGGAACAA
TATATATTAAAAATTATGAATATCTAGATTCAAAACCTAAATATAAAAATAAACAAATTT
CCTATATAGATGTAGTTCCATACCCGCGGGGAAAGGGCG
Restriction sites to linearize plasmid KspI (SacII)
Selectable marker used to select the mutant parasitehdhfr/yfcu
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedure5-fluorocytosine (5-FC)
Additional remarks genetic modification
Additional remarks selection procedure
Other details transgene
Promoter
Gene Model of Parasite PBANKA_1319500
Gene Model P. falciparum ortholog PF3D7_1455800
Gene productLCCL domain-containing protein
Gene product: Alternative nameLAP4; LCCL/lectin adhesive-like protein 4; CCp2
Primer information details of the primers used for amplification of the promoter sequence  Click to view information
Primer information details of the primers used for amplification of the promoter sequence  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
3'-UTR
Gene Model of Parasite PBANKA_1359600
Gene producttransmission blocking target antigen precursor 6-cysteine protein
Gene product: Alternative nameP48/45
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to view information
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to hide information
Sequence Primer 13’-cggGGTACCCGCATATCGAAATGATGCTATC
Additional information primer 13’utr of the p48/45 gene (PB001525.02.0; 3’48/45; Asp718/XbaI; 1882
Sequence Primer 23’- gcTCTAGAAGTAGTGTGTAGCGTATTC
Additional information primer 23’utr of the p48/45 gene (PB001525.02.0; 3’48/45; Asp718/XbaI;1881
Insertion/Replacement locus
Replacement / InsertionReplacement locus
Gene Model of Parasite PBANKA_0306000
Gene product6-cysteine protein
Gene product: Alternative name230p
Primer information details of the primers used for amplification of the target sequences  Click to view information
Primer information details of the primers used for amplification of the target sequences  Click to hide information
Sequence Primer 15'-cccaagcttccgcgggtatatggtaaagaacctactaacac
Additional information primer 1primer L1345: 0.7kb 5'region of PB000214.00.0 (230p gene)
Sequence Primer 25'-cccaagcttgatgtgttttatttggatgtgc
Additional information primer 2primer L1346: 0.7kb 5'region of PB000214.00.0 (230p gene)
Sequence Primer 35'-ccggaattctcttgagcccgttaatg
Additional information primer 3primer L1347: 1kb 3'region of PB000214.00.0 (230p gene)
Sequence Primer 45'-tccccgcgggtatggaactacatctatatagg
Additional information primer 4primer L1348: 1kb 3'region of PB000214.00.0 (230p gene)

  Transgene: Mutant parasite expressing a transgene
Type and details of transgene
Is the transgene Plasmodium derived Transgene: not Plasmodium
Transgene nameGFP (gfp-mut3)
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/constructPlasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
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Plasmid/construct sequence
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AATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTT
AATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACC
GATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTT
CTCCTTACGCATCTGTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTGC
TCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGA
CGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAGCTGC
ATGTGTCAGAGGTTTTCACCGTCATCACCGAAACGCGCGAGACGAAAGGGCCTCGTGATA
CGCCTATTTTTATAGGTTAATGTCATGATAATAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAACTGTCAGACCAAGTTTACTCATATATACTTTAGATTGAT
TTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATG
ACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATC
AAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAA
CCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAG
GTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTA
GGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTA
CCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAG
TTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTG
GAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCATTGAGAAAGCGCCACG
CTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAG
CGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGC
CACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAA
AACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATG
TTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCT
GATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAA
GAGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGG
CACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAG
CTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGA
ATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGATTACGCCAAGCTT
CCGCGGGTATATGGTAAAGAACCTACTAACACAATAAAATATTTAAATAATGTATTTCCT
ATAAATAAATTTACAGATTTATTTTTTAATACAAAAGATATAGATATACCAGAAATAAAT
GATCAGTTTAAAGGTTTTAAATTCTTTATGACATCATTTATAAATCATGGATCATATCCA
CTAACAATAGAATGTGGTGTAACAAATGGTGGAACTAGTTATAAAAGAGCAATTATTTTA
TTGCATGTTCGAACTGATTTAAAAGATAGACCAGTTTCATTTTGTGATTTTCGAAAAGGA
GAATTATATAATTATTTGAATGCTTATACTGAAGGGGATGTATGCATAATAATTTCCAAA
TCAAATACAAGTTTTGGTTTTAGATGCCCAGTAAATACAAAAAAAATGCCAAAAAATTGT
TTTACGCAAGTATATGAAAAAGGGTATCTAAATGACGCCAATAAAATTAATACTAAAAAT
GTTATTAACTATTCATTTGAAAATCCAGAATATGCGCTAGCTGGTTYTAATTATACATTA
ACAAAATCGTATCAATTTGAATGTCATTGTGTAGATAAAGAAACAGAACAAATTGTAAAA
ACGGTTTTAGTCAAATATGTAAATGAAGATGAAATATATGATTATAATGATTTTCCAATG
GTGAATCACAAACCTATTATTGCACATCCAAATAAAACACATCAAGCTTGCATGCCTGCA
GGAATTCGATGGCCGCTCTAGCTTTGATCCCGTTTTTCTTACTTATATATTTATACCAAT
TGATTGTATTTATAACTGTAAAAATGTGTATGTTGTGTGCATATTTTTTTTTGTGCATGC
ACATGCATGTAAATAGCTAAAATTATGAACATTTTATTTTTTGTTCAGAAAAAAAAAACT
TTACACACATAAAATGGCTAGTATGAATAGCCATATTTTATATAAATTAAATCCTATGAA
TTTATGACCATATTAAAAATTTAGATATTTATGGAACATAATATGTTTGAAACAATAAGA
CAAAATTATTATTATTATTATTATTTTTACTGTTATAATTATGTTGTCTCTTCAATGATT
CATAAATAGTTGGACTTGATTTTTAAAATGTTTATAATATGATTAGCATAGTTAAATAAA
AAAAGTTGAAAAATTAAAAAAAAACATATAAACACAAATGATGTTTTTTCCTTCAATTTC
GATTGATAATTATGCAGCCCAGCTTAATTCTTTTCGAGCTCTTTATGCTTAAGTTTACAA
TTTAATATTCATACTTTAAGTATTTTTTGTAGTATCCTAGATATTGTGCTTTAAATGCTC
ACCCCTCAAAGCACCAGTAATATTTTCATCCACTGAAATACCATTAAATTTTCAAAAAAA
TACTATGCATATAATGTTATACATATAAACATAAAACGCCATGTAAATCAAAAAATATAT
AAAAATATGTATAAAAATAAATATGCACTAAATATAAGCTAATTATGCATAAAAATTAAA
GTGCCCTTTATTAACTAGAACTAGTCGTAATTATTTATATTTCTATGTTATAAAAAAATC
CTCATATAATAATATAATTAATATATGTAATGTTTTTTTTATTTTATAATTTTAATATAA
AATAATATGTAAATTAATTCAAAAAATAAATATAATTGTTGTGAAACAAAAAACGTAATT
TTTTCATTTGCCTTCAAAATTTAAATTTATTTTAATATTTCCTAAAATATATATACTTTG
TGTATAAATATATAAAAATATATATTTGCTTATAAATAAATAAAAAATTTTATAAAACAT
AGGGGGATCCATGGTTGGTTCGCTAAACTGCATCGTCGCTGTGTCCCAGAACATGGGCAT
CGGCAAGAACGGGGACCTGCCCTGGCCACCGCTCAGGAACGAATTTAGATATTTCCAGAG
AATGACCACAACCTCTTCAGTAGAAGGTAAACAGAATCTGGTGATTATGGGTAAGAAGAC
CTGGTTCTCCATTCCTGAGAAGAATCGACCTTTAAAGGGTAGAATTAATTTAGTTCTCAG
CAGAGAACTCAAGGAACCTCCACAAGGAGCTCATTTTCTTTCCAGAAGTCTAGATGATGC
CTTAAAACTTACTGAACAACCAGAATTAGCAAATAAAGTAGACATGGTCTGGATAGTTGG
TGGCAGTTCTGTTTATAAGGAAGCCATGAATCACCCAGGCCATCTTAAACTATTTGTGAC
AAGGATCATGCAAGACTTTGAAAGTGACACGTTTTTTCCAGAAATTGATTTGGAGAAATA
TAAACTTCTGCCAGAATACCCAGGTGTTCTCTCTGATGTCCAGGAGGAGAAAGGCATTAA
GTACAAATTTGAAGTATATGAGAAGAATGATGCTAGCGGAGGAGGTGGATCTGGTGGAGG
TGGAAGTGCTAGCGTGACAGGGGGAATGGCAAGCAAGTGGGATCAGAAGGGTATGGACAT
TGCCTATGAGGAGGCGGCCTTAGGTTACAAAGAGGGTGGTGTTCCTATTGGCGGATGTCT
TATCAATAACAAAGACGGAAGTGTTCTCGGTCGTGGTCACAACATGAGATTTCAAAAGGG
ATCCGCCACACTACATGGTGAGATCTCCACTTTGGAAAACTGTGGGAGATTAGAGGGCAA
AGTGTACAAAGATACCACTTTGTATACGACGCTGTCTCCATGCGACATGTGTACAGGTGC
CATCATCATGTATGGTATTCCACGCTGTGTTGTCGGTGAGAACGTTAATTTCAAAAGTAA
GGGCGAGAAATATTTACAAACTAGAGGTCACGAGGTTGTTGTTGTTGACGATGAGAGGTG
TAAAAAGATCATGAAACAATTTATCGATGAAAGACCTCAGGATTGGTTTGAAGATATTGG
TGAGGCTTCGGAACCATTTAAGAACGTCTACTTGCTACCTCAAACAAACCAATTGCTGGG
TTTGTACACCATCATCAGAAATAAGAATACAACTAGACCTGATTTCATTTTCTACTCCGA
TAGAATCATCAGATTGTTGGTTGAAGAAGGTTTGAACCATCTACCTGTGCAAAAGCAAAT
TGTGGAAACTGACACCAACGAAAACTTCGAAGGTGTCTCATTCATGGGTAAAATCTGTGG
TGTTTCCATTGTCAGAGCTGGTGAATCGATGGAGCAAGGATTAAGAGACTGTTGTAGGTC
TGTGCGTATCGGTAAAATTTTAATTCAAAGGGACGAGGAGACTGCTTTACCAAAGTTATT
CTACGAAAAATTACCAGAGGATATATCTGAAAGGTATGTCTTCCTATTAGACCCAATGCT
GGCCACCGGTGGTAGTGCTATCATGGCTACAGAAGTCTTGATTAAGAGAGGTGTTAAGCC
AGAGAGAATTTACTTCTTAAACCTAATCTGTAGTAAGGAAGGGATTGAAAAATACCATGC
CGCCTTCCCAGAGGTCAGAATTGTTACTGGTGCCCTCGACAGAGGTCTAGATGAAAACAA
GTATCTAGTTCCAGGGTTGGGTGACTTTGGTGACAGATACTACTGTGTTTAACTCGATCC
CGTTTTTCTTACTTATATATTTATACCAATTGATTGTATTTATAACTGTAAAAATGTGTA
TGTTGTGTGCATATTTTTTTTTGTGCATGCACATGCATGTAAATAGCTAAAATTATGAAC
ATTTTATTTTTTGTTCAGAAAAAAAAAACTTTACACACATAAAATGGCTAGTATGAATAG
CCATATTTTATATAAATTAAATCCTATGAATTTATGACCATATTAAAAATTTAGATATTT
ATGGAACATAATATGTTTGAAACAATAAGACAAAATTATTATTATTATTATTATTTTTAC
TGTTATAATTATGTTGTCTCTTCAATGATTCATAAATAGTTGGACTTGATTTTTAAAATG
TTTATAATATGATTAGCATAGTTAAATAAAAAAAGTTGAAAAATTAAAAAAAAACATATA
AACACAAATGATGTTTTTTCCTTCAATTTCGGGTACCGACCATATAAGAATTAACCCTTT
ACTTTTTTCGTATTTTTCATTAACTTCCATTTGTTAATTTTTTAAAATAAGTTTTTATTT
TCAATAAAAAAACTATATTAATTTAATCTAATTATAAGCAAAAAATTAAATTCAAAGAAT
AAAATTATATGCACATAATGTGTGCCCCTTTAAAACAAATATTCGATGTTTAATTCGTAC
TTTATGCTAATTTTTTATTATTCACAGATTTTATATTAGAGTTATAAAAATTTAGAATTT
TTTCAAGTAAAATATTATTAGTTAATGGCATTAAAATGTATAAGGAAAAGTTAATATAAA
AATTAAAAAAAACAGTTACACGTATATTACGCATACAACGATGTATATATATTCATATAT
ATTAATAATTCTAGAGTCGCGGCCGCTTTACTTGTACAGCTCGTCCATGCCGAGAGTGAT
CCCGGCGGCGGTCACGAACTCCAGCAGGACCATGTGATCGCGCTTCTCGTTGGGGTCTTT
GCTCAGGGCGGACTGGGTGCTCAGGTAGTGGTTGTCGGGCAGCAGCACGGGGCCGTCGCC
GATGGGGGTGTTCTGCTGGTAGTGGTCGGCGAGCTGCACGCTGCCGTCCTCGATGTTGTG
GCGGATCTTGAAGTTCACCTTGATGCCGTTCTTCTGCTTGTCGGCCATGATATAGACGTT
GTGGCTGTTGTAGTTGTACTCCAGCTTGTGCCCCAGGATGTTGCCGTCCTCCTTGAAGTC
GATGCCCTTCAGCTCGATGCGGTTCACCAGGGTGTCGCCCTCGAACTTCACCTCGGCGCG
GGTCTTGTAGTTGCCGTCGTCCTTGAAGAAGATGGTGCGCTCCTGGACGTAGCCTTCGGG
CATGGCGGACTTGAAGAAGTCGTGCTGCTTCATGTGGTCGGGGTAGCGGCTGAAGCACTG
CACGCCGTAGGTCAGGGTGGTCACGAGGGTGGGCCAGGGCACGGGCAGCTTGCCGGTGGT
GCAGATGAACTTCAGGGTCAGCTTGCCGTAGGTGGCATCGCCCTCGCCCTCGCCGGACAC
GCTGAACTTGTGGCCGTTTACGTCGCCGTCCAGCTCGACCAGGATGGGCACCACCCCGGT
GAACAGCTCCTCGCCCTTGCTCACCATGGTGGCGACCGGTGGATCCTTTTTATCATTTGG
ATAATTAATTCTTATATTTATTCTGAATTAAATCAAACTTCCTATTCATATGTACATGCA
TCTATATGTATGAAATACATATAATACTACTATATACCACCAAATTACATATCCAAATAA
CTTGTGCCCTTAACACTGCATATATATGTTTGTCCATATATTTGCAAATATCTATATATA
CTATAAACCTTATGCACAAACCCCTTTTTCGCATATAAAAATGAATATATATATATATAT
ATATATATACTGTCATATGAAAATATATATCCATTTATTTATATTTATATTTATATTATC
TTGCATAAACATTTTATAATATATTTTCTTTAATATAACTTTCCCATATACGTACACACA
TATATAAATATATAGTATGTGTACATATCTACTTATTTTATTGCATATTATATCCCCTTT
TTTTCTCCAATTTTTTTTTTTTATACATGTAAAAGTCGAAAATTCCCATTTATAATAAAC
TTAGGAGAAAATATATATTATTAACTAGTAGTGGTGAATAAGCTCTTTGAAGTCTCAAAA
CAATAAAATTTAAATGTGCATAAATAAGATTGTGAATACGCAAAAATGCAAATAAATACG
CATATTATCATTCATTTCTTAATTATTTAGAAACGGTTCGAACTGCTTCTAATCGTGTCT
TAAGACAAACCCACATCTTATCTCAAAGTTTAGCATTTCGAAGCTTATTATTGTTTCTAA
AACATCTCAACATTTTACTTACAAACTTTGAATGAAAAAAAACAATTTTATAATTATATA
CTAACCATAAAAAAATAAATACCCAAAACGAATAAAATATATTATGTACCTATTTTAAAT
GCGTTTATACCCAAATTTTCGAACCACAATTTTTATATGAACATGTTAATTTTATTTCAC
GTCCCCATTTTATATATATAAAATTTTTTTCCTATTTCTTATTACCTTTAATATTATTTA
TACTAGATACAGAAATAATTTAAAAGGTACTATTTAAAAATGTGTTACCATTTTATTTAA
CTCACAAGCCCCTTTATTATATTAAATTTAAAAGCTTATTTTATGAGGGTTTATATAAAA
ATTCATTCGGTTTTAAATGTAAATATATATATGCACATAATTTTGTATAAATAAAACATA
TATATACATTATAATTATTTATTTGACAGTTTTGAAGGATTTATGAAAAGGAAAAATTTA
TCATGTGTATATATGTTTTTATATTTTATTGACAAGAAATTATAAAGCTCGGAAAATTAA
TAGAAAAGTAGGTGCAAGCATGCACATATAAATACATTAAACACCAAAATACTTTTCCAA
TGACTTGCCTACATGTCTTTGTACATATAATACATACATAGTATAATAAAATATGAAGCT
TTTAAATTATAATAAATTTTTATCTTCATCGGTATAAGGTTCAGATGCAGGGGCGTTATC
TTCCTCATTAGTATAAGAACCTTTTGTTTCATCATCATCATTATTATCTTCGGTACTTAA
TCTGTTTAAATATGATATCTTTATAAATGAAGCAATACCACATTTTTACACAAATATATT
ACATTTTTTATGTATTGCATATGTGAAATGTATGAGTGATATAATATGGTAGACATGAAT
AGGCTAAAACATAGATAAAACCGAACTAAACAAATAAATATAGGAAAATACCCCAATACG
AATATTTGTAACATTAAAAATTAAAAAGACACACTTTAATTAAATAAAATAGAGACGTGA
ATAAAAATGTATTTATAATAAAAGTACGTAAAAAGAAAGCGTTACCAAAACATAAATGAT
TTTTTTCTAACTAAATAAAATTGCATATGTGAAGGTATAATATTTTCCTACATAAAATGG
CGTTTATTGGTTTTTTAATATGTTTTACTTCATTTTGATTTATTACACATATATAAATTT
TTTACAAAATTACGCCATTAATATAGACATTTTTAAGAATGTTGTATTTATTGATCATAT
TCGAACTAAATTCCGTTGTAAATTCACTCAGGTGCATGCAAAAGATGCGGTATTTTTTTG
TACTATTAAAAATTTATATATACAATAATTGTTCAAAATACATAATTTTTTTTAAGCATT
TTACAAACACAAATAATTTTTTCAAAATAAAATAAATTGTTACGTATCTCGAAAATAGTG
TATTTAATATTATACAAATGTAAGGGCAATACATATATATATATTTATTTATTTAAAAGA
CAATTTATAAATGCATATTATTCATAAATTTTTATAATATTTCTCGATAATTTTGTTCGC
AATTTGATGGTGACCCCTTATACATTTGAATTTGCTTTAAAAATATTAAAAAGGAAAATT
TTTTTTTGTTATATAGAGTCATCATGCTTGATTATTTTATTTCTGAATTTAATTTATCCT
CATGTATTTATTATAACAATACGACGTGAAGTTAAAACACCAGTTGCATTGATCAATTTA
AAATTTTGATAAAAAGTATTTAAAAATAAAAGGTTTATAAATAGGGGCTTATTCATTTAT
ATTTCTTTTTATTATATTTTCTTTATATTTTTCAACAAATATTTATAATTCGTAATTTTT
TCGTCAATTTAATATATTTGCCTTTAAGTTTTTCGTAAATTACACTTCAGTAATAATAAT
AAAGCTACATTTTATAGTGCGCATTGTTAAGCATATAATCGATAGGACTTTTAATATATA
TTTTGTTTTTACACAAAATAAGAAGAAGGTCCCTACATTTTTTTCGTTAAAAAGGAAATC
TCAATAATATTAAATTGTGTGTAATTTTTTTTGATGTATACAAATATGACGTGTATATAC
GCAAAGGTGCTTGTAAAACAAATGGTATTAAGCTGTGTGGTCACATTTGTAGTTACATAG
CAATTATATATATATCATTTCTAATTTTAATTCAATTTAATTTCGGTATTAACTATGCAT
ATAAACATATTGTTATTATTATCTTGCCTATCATAATAAATTTTGTGTCTATATAGAAAT
GTATTATCTATTTTTTAGCGAAGTAGCATAAGTATTATTTATATTCAAAGAAATAAATAA
AGGTATTAAAATTAATACGAAAATAAAAATTAAAGGATGATGGCGATTATTAGTTCTTTT
TAATTCCATCATCTATCCTTATATGTAGTATATTGGGGTTAGAGATAGTGGGTTATGAAT
ACCAAAAATATAGAAAATTGCAAAGGAGTTGATTTATTCTCTGTTGTATAAGAATGTACA
CAGTTAAAGTTAGTATATATGTGTATATTTTTCAGTCTATATAAATATACTTTTGTTTTC
TCATTGGTATGTTCAATTTTTTATATTATTTTACGTGTCGATGGATACAATTTAGTATTT
TTTTTAATTTTGTATTTTTGAATTATATTAATCTAGATTATTCATATATTTTTTCATATG
CAGATAGAAAAAGGTTTCATACGTTAGTTTATCCTACAAATTGAATATTAACACATACAT
ATATTTATATTTTTTATTAATAGAAGGATCCAAAATGAGTAGATCTTCTAAGAACGTCAT
CAAGGAATTCATGAGATTCAAGGTTAAAATGGAAGGTACTGTTAACGGCCACGAATTCGA
AATCGAAGGTGAAGGTGAGGGTAGACCATATGAAGGTCACAACACAGTCAAGTTGAAGGT
TACTAAGGGTGGTCCACTGCCATTCGCTTGGGACATCTTGTCTCCACAATTCCAATACGG
TTCTAAGGTCTACGTCAAGCACCCAGCTGACATTCCAGACTACAAGAAGTTGTCCTTCCC
AGAAGGTTTCAAGTGGGAAAGGATCATGAACTTCGAAGACGGTGGCGTTGTTACTGTTAC
TCAAGACTCCTCCTTGCAAGACGGTTGTTTCATCTACAAGGTCAAGCTCATTGGTGTCAA
CTTCCCATCTGACGGTCCAGTCATGCAAAAGAAGACTATGGGTTGGGAAGCTTCTACCGA
ACGTTTGTACCCAAGAGACGGTGTCTTGAAGGGTGAAATCCACAAGGCCTTGAAGTTGAA
GGACGGTGGTCACTACTTGGTCGAATTCAAGTCTATCTACAAGGCCAAGAAGCAAGTCCA
ATTGCCAGGCTATTACTACGTTGACTCTAAGTTGGACATCATCTCTCACAACGAAGACTA
CACTATCGTCGAACAATACGAACGTACTGAAGGTAGACACCACTTGTTCTTGTAAACTAG
TTCTAGAAGTAGTGTGTAGCGTATTCTTTTATTTTACAGAAAATGTATATTATCATTTTT
CGCATTTCATCGTTTAAACAAGTACATGAACGTGTGCATGCAATTATTTCTGTGTTTGGA
TTTGTATTCAAATCATCATGAACTTTTTTTGAATATTCGTTACAAGCCATAATAGAATAT
ACACCATCTACAATATAATTTTTTTTTCACTATTTTATATTTCATCCTATTGTGTATGTA
TATTCCTTTAATAAAAAATCCATATGCTTAACATTCACATATATTAATAATTTTAATTAA
TTTTTTTTTTTGCACAGATAAAACTTTTCTTTTTAAAAAAAAGGTATATACACTCTTTTT
TACCCCACATTTAACTGATTTTCACTCACCATTACATATAGCTATATATTGCATATTACT
ATTATGTAAGGCAAATGTTTATTATTATTGCTGTTATTTTTTATTTATATATTTTTTTCC
ATATATCAATTTAAGGAGAAATAAAATAATTTGCTATTTGAAAAAATATAAAACAAATAT
CTAGTCGTGCAATACTGAATTCGAATACTTAAAACAAAAAATAAATTAATTAAATACCCT
TTTAATATTGTAGTTAAAATCGATGTGTTTAGAGAATATTTTTTATTGCTATTTATCTTC
TTTTTTTTATTTTTCTTCCATGTTTTCTCATTCAGCTTTCTATGTATTTTAGTAATATTC
TCCACACACAAACTATAAATTTTCTTATGAAAAATCACAAAATTTAGCAAATAGCGCTTA
GGCATGTACTCGTAAATAAGCATGTGCATAGTATAATACACTTCTCATCAATTTTGAGAG
GATTTTATTTAATTTCGGCACGCCCCTCTCAACTTGTGTTTATCACATATTCAATACTCC
ATAAAAAATGATAGCATCATTTCGATATGCGGGTACCGAGCTCGAATTCTCTTGAGCCCG
TTAATGAAATAGATACAATTCATTCATGTTATATACATCTAGAACATAATCTGAATATGG
TTCAAGTTAAATGTCCAAAAATTATAAAAAGTGATGATATTTTTGATGGTAATACCATAA
TAGACACCAAGGTAACATCACGAAGTAGTCAACAAAATAATTTTTATTTAGAAAATACAG
ATGTTGAACCAGAAGAAATAGAGAAATATAAAAATATAGAATACATACCAGAAAACGATG
AAGTAATGCATCTAGACAAAAAAGAAAAGCTAGATGATATATTACCAGGTGTTATCATAT
TAGATAAAAATAAAATGTTCAAAGAAAAAGGACATTTCACTTTTGTTACTCCATTAATTG
TAGAAAAGGTATTAATATTAAAAATATATTGTGATAATACTAAAACAATAATTAATAATA
TGAAAGGGAAAAAAGGTATTACAGTAATAAGGATTTCTCAAAATACAACAAAAAATAAAT
TTTATGGATGTGACTTTTCAGGTAATTCTAAAAAAACATTTTACTATTCCAATGTTTATG
ATTTAGAAAAAAAAAATGAGTTTTGTGAAATAGAATTAAAAGAAAATATAGTAGTTAGCT
TAAATTGTCCAACTGGTAAAATTAATCCAAAAAATTGTTTTAGAAATGTATATATAAAAA
GTAATATGAATGAACAAACAACCGAAAATATAGAAAATATATTTAACGAAATAAAAGTTA
TAGATGCAGATTATTTTATAAATAATTCATCAACCTTTTTGATGATTTCCAAAATTACAA
AAAAAGAGTTTGATTTTTATTGTACATGTGAAGATTATAAAACCAAAAATATAGGAACAA
TATATATTAAAAATTATGAATATCTAGATTCAAAACCTAAATATAAAAATAAACAAATTT
CCTATATAGATGTAGTTCCATACCCGCGGGGAAAGGGCG
Restriction sites to linearize plasmid KspI (SacII)
Selectable marker used to select the mutant parasitehdhfr/yfcu
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedure5-fluorocytosine (5-FC)
Additional remarks genetic modification
Additional remarks selection procedure
Other details transgene
Promoter
Gene Model of Parasite PBANKA_0416100
Gene Model P. falciparum ortholog PF3D7_0905300
Gene productdynein heavy chain, putative
Gene product: Alternative name
Primer information details of the primers used for amplification of the promoter sequence  Click to view information
Primer information details of the primers used for amplification of the promoter sequence  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
3'-UTR
Gene Model of Parasite PBANKA_1010600
Gene productcalmodulin, putative
Gene product: Alternative namecam
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to view information
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to hide information
Sequence Primer 1tgcTCTAGAATTATTAATATATATGAATATATATACATCGTTGTATGCG
Additional information primer 12566, Asp718
Sequence Primer 2cggGGTACCGACCATATAAGAATTAACCC
Additional information primer 22576, XbaI
Insertion/Replacement locus
Replacement / InsertionReplacement locus
Gene Model of Parasite PBANKA_0306000
Gene product6-cysteine protein
Gene product: Alternative name230p
Primer information details of the primers used for amplification of the target sequences  Click to view information
Primer information details of the primers used for amplification of the target sequences  Click to hide information
Sequence Primer 15'-cccaagcttccgcgggtatatggtaaagaacctactaacac
Additional information primer 1primer L1345: 0.7kb 5'region of PB000214.00.0 (230p gene)
Sequence Primer 25'-cccaagcttgatgtgttttatttggatgtgc
Additional information primer 2primer L1346: 0.7kb 5'region of PB000214.00.0 (230p gene)
Sequence Primer 35'-ccggaattctcttgagcccgttaatg
Additional information primer 3primer L1347: 1kb 3'region of PB000214.00.0 (230p gene)
Sequence Primer 45'-tccccgcgggtatggaactacatctatatagg
Additional information primer 4primer L1348: 1kb 3'region of PB000214.00.0 (230p gene)